RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 JMJD4Q9H9V9 463 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CYP26B1Q9NR63 512 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 GGA3Q9NZ52 723 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TNFRSF10DQ9UBN6 386 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 PCDHGA7Q9Y5G6 932 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
PDGFC-201ENST00000274071 GZMAP12544 262 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ADRA2BP18089 450 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 MMP8P22894 467 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 UQCRC1P31930 480 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 GJC1P36383 396 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ABCG1P45844 678 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 IL1RL1Q01638 556 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TOR2AQ5JU69 321 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CATSPEREQ5SY80 951 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CCNJQ5T5M9 372 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SLC16A12Q6ZSM3 486 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ARCQ7LC44 396 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 UNC45BQ8IWX7 931 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 EID3Q8N140 333 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 OR6Q1Q8NGQ2 317 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SNAPC3Q92966 411 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 NSUN4Q96CB9 384 aaKnown RBP9.34□□□□□ -0.91
PDGFC-201ENST00000274071 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ADAMTS10Q9H324 1103 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 DIABLOQ9NR28 239 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ACOXLQ9NUZ1 547 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 BARHL2Q9NY43 387 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CACNA1SQ13698 1873 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 PDZK1P1A8MUH7 402 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PDXKO00764 312 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 NRP1O14786 923 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 LIASO43766 372 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CALUO43852 315 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RNGTTO60942 597 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 UPK1BO75841 260 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PAHP00439 452 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ENO3P13929 434 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 HTR3AP46098 478 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC1A6P48664 564 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GPR85P60893 370 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RPS6P62753 249 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RHDQ02161 417 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC12A1Q13621 1099 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 HIST2H2ACQ16777 129 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC35G1Q2M3R5 365 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ANKRD22Q5VYY1 191 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 STEAP3Q658P3 488 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 BBS12Q6ZW61 710 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SPATC1Q76KD6 591 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 THNSL1Q8IYQ7 743 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CBR4Q8N4T8 237 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RHOXF1Q8NHV9 184 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC2A14Q8TDB8 520 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PPWD1Q96BP3 646 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM80Q96HE8 168 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 UROC1Q96N76 676 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ASB2Q96Q27 587 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 INTS2Q9H0H0 1204 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MIR1-1HGQ9H1L0 117 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 C2orf40Q9H1Z8 148 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 IFT80Q9P2H3 777 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CPNE7Q9UBL6 633 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 TCRBV9S1A1TA0A576 114 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 A8MV72 311 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PI4K2BG5E9Z4 385 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CTDSP2O14595 271 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC37A4O43826 429 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MAP3K6O95382 1288 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 BMP3P12645 472 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 IFI30P13284 250 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GRAPQ13588 217 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PRR5LQ6MZQ0 368 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RINT1Q6NUQ1 792 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 C15orf52Q6ZUT6 534 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC51AQ86UW1 340 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 C12orf56Q8IXR9 622 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GALNT11Q8NCW6 608 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 NRBF2Q96F24 287 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 BTN2A3PQ96KV6 586 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 TRIM15Q9C019 465 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PCDHAC1Q9H158 963 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ERVMER34-1Q9H9K5 563 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 DCAF16Q9NXF7 216 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SFMBT1Q9UHJ3 866 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 XPO7Q9UIA9 1087 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ANAPC7Q9UJX3 599 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 AP4E1Q9UPM8 1137 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms