RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KIFC1Q9BW19 673 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 ACE2Q9BYF1 805 aaPredicted RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 SMG9Q9H0W8 520 aaKnown RBP12.31□□□□□ -0.44
SDE2-201ENST00000272091 ATXN3LQ9H3M9 355 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 BFARQ9NZS9 450 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 SENP1Q9P0U3 644 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 FAM169AQ9Y6X4 670 aa12.31□□□□□ -0.44
SDE2-201ENST00000272091 A0A1B0GVM2 712 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 TCAF2A6NFQ2 919 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 RFPL1O75677 317 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 SLC18A1P54219 525 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 WNT3AP56704 352 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 MPP3Q13368 585 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 FRG1Q14331 258 aaKnown RBP12.3□□□□□ -0.44
SDE2-201ENST00000272091 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
SDE2-201ENST00000272091 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 LINC00523Q86TU6 105 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 SHKBP1Q8TBC3 707 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 CERS2Q96G23 380 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 CCT8L2Q96SF2 557 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 IL22Q9GZX6 179 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 TRIM49D1C9J1S8 452 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 KDELR3O43731 214 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 ASMTLO95671 621 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 POLBP06746 335 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 EPCAMP16422 314 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 DRD4P21917 467 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 SLC18A2Q05940 514 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 ALG1LQ6GMV1 187 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 ZNF354CQ86Y25 554 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 GDAP1Q8TB36 358 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 MAN1C1Q9NR34 630 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 ILVBLA1L0T0 632 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 MYL4P12829 197 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 RGRP47804 291 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 EPHA5P54756 1037 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 PCSK7Q16549 785 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 MCMBPQ9BTE3 642 aa12.3□□□□□ -0.44
SDE2-201ENST00000272091 DNMT3BQ9UBC3 853 aaKnown RBP12.3□□□□□ -0.44
SDE2-201ENST00000272091 CLASP2O75122 1294 aaKnown RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 NEK3P51956 506 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SLC5A9Q2M3M2 681 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ZNF473Q8WTR7 871 aaKnown RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 CKAP2Q8WWK9 683 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CCDC78A2IDD5 438 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 TBL1XO60907 577 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 RHOCP08134 193 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 FOXN2P32314 431 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SETD3Q86TU7 594 aaPredicted RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SDE2-201ENST00000272091 MRPS31Q92665 395 aaKnown RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 AGAP2Q99490 1192 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SLC17A7Q9P2U7 560 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ZMPSTE24O75844 475 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 FAM107AO95990 144 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ATXN1LP0C7T5 689 aaKnown RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 PYGBP11216 843 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ARNTP27540 789 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CCNFP41002 786 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 ARF5P84085 180 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 UBE3AQ05086 875 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 MGAT5Q09328 741 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 POU6F1Q14863 301 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 RNF219Q5W0B1 726 aaPredicted RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 HTR3DQ70Z44 454 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CCDC117Q8IWD4 279 aaPredicted RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 ALG14Q96F25 216 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CFAP97Q9P2B7 532 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SLC2A6Q9UGQ3 507 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CLEC4EQ9ULY5 219 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
SDE2-201ENST00000272091 ANKRD36A6QL64 1941 aa12.29□□□□□ -0.44
SDE2-201ENST00000272091 CA3P07451 260 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 MZF1P28698 734 aaPredicted RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 CYTH1Q15438 398 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ZSCAN26Q16670 478 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 LRRC34Q8IZ02 419 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 MGME1Q9BQP7 344 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ASAH2Q9NR71 780 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 YBX2Q9Y2T7 364 aaKnown RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 IKBKGQ9Y6K9 419 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms