RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PPHLN1Q8NEY8 458 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 C10orf82Q8WW14 230 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 THOC1Q96FV9 657 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 MECRQ9BV79 373 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ATXN3LQ9H3M9 355 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 GKN1Q9NS71 199 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 IARS2Q9NSE4 1012 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 TREX1Q9NSU2 369 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 GGT7Q9UJ14 662 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 SLC12A4Q9UP95 1085 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ZFP37Q9Y6Q3 630 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 MYLKQ15746 1914 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CCDC78A2IDD5 438 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 C2orf78A6NCI8 922 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 LILRB3O75022 631 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 GLRA3O75311 464 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 GSRP00390 522 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 F7P08709 466 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ACRP10323 421 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ARNTP27540 789 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ARCN1P48444 511 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 PPP3CCP48454 512 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 LBRQ14739 615 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 VEPH1Q14D04 833 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 PCSK7Q16549 785 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ARMC3Q5W041 872 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 DNAJB7Q7Z6W7 309 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 ZNF354CQ86Y25 554 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CNTN4Q8IWV2 1026 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 FITM2Q8N6M3 262 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 OR52K2Q8NGK3 314 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 TSSK1BQ9BXA7 367 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 KLF16Q9BXK1 252 aaPredicted RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 RXFP1Q9HBX9 757 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 SNX15Q9NRS6 342 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CHD5Q8TDI0 1954 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 A0A0D9SEW6 157 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 GOLGA8TH3BQL2 631 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 PRRG1O14668 218 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 BIRC5O15392 142 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 PRKCGP05129 697 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 BPGMP07738 259 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 GSTA1P08263 222 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 RAG1P15918 1043 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 HOXD9P28356 352 aaPredicted RBP16.85■□□□□ 0.29
CCDC40-201ENST00000269318 CORO1AP31146 461 aaKnown RBP16.85■□□□□ 0.29
CCDC40-201ENST00000269318 CDH4P55283 916 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 RPS24P62847 133 aaKnown RBP16.85■□□□□ 0.29
CCDC40-201ENST00000269318 PPM1JQ5JR12 505 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 TMCO4Q5TGY1 634 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 CES4AQ5XG92 561 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 ESRP1Q6NXG1 681 aaKnown RBP16.85■□□□□ 0.29
CCDC40-201ENST00000269318 KDELC2Q7Z4H8 507 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 WBP2Q969T9 261 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 MAGEH1Q9H213 219 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 DCDC2Q9UHG0 476 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 MTO1Q9Y2Z2 717 aaKnown RBP16.85■□□□□ 0.29
CCDC40-201ENST00000269318 INSL5Q9Y5Q6 135 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 USH1CQ9Y6N9 552 aa16.85■□□□□ 0.29
CCDC40-201ENST00000269318 TIMM44O43615 452 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 BAIAP3O94812 1187 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 UBOX5O94941 541 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TYK2P29597 1187 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 SERPINB8P50452 374 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 CSRP3P50461 194 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 GNA12Q03113 381 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ITKQ08881 620 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TAF12Q16514 161 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 INSCQ1MX18 579 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 RABGAP1LQ5R372 815 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 CMC1Q7Z7K0 106 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TRIM42Q8IWZ5 723 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ZNF599Q96NL3 588 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 YME1L1Q96TA2 773 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 MRPL17Q9NRX2 175 aaKnown RBP16.84■□□□□ 0.29
CCDC40-201ENST00000269318 NSMCE4AQ9NXX6 385 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 SLC2A6Q9UGQ3 507 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 AGO1Q9UL18 857 aaKnown RBP16.84■□□□□ 0.29
CCDC40-201ENST00000269318 MAFFQ9ULX9 164 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 MUSKO15146 869 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TEX28O15482 410 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 PLIN3O60664 434 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 SIN3BO75182 1162 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TGDSO95455 350 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ETFBP38117 255 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 SGSHP51688 502 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 CCDC15Q0P6D6 951 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 N4BP2L1Q5TBK1 243 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-201ENST00000269318 FYB2Q5VWT5 728 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 TMEM199Q8N511 208 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 GBP7Q8N8V2 638 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-201ENST00000269318 RAB3IL1Q8TBN0 382 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ZNF398Q8TD17 642 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ATP2A3Q93084 1043 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 ATXN7L3BQ96GX2 97 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms