RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 UGT2B28Q9BY64 529 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CAB39LQ9H9S4 337 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SF3B1O75533 1304 aaKnown RBP eCLIP5.77□□□□□ -1.49
VCAN-201ENST00000265077 SALL1Q9NSC2 1324 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TEX51A0A1B0GUA7 166 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MTMR2Q13614 643 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SPANXN3Q5MJ09 141 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 OR52E8Q6IFG1 317 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 BORAQ6PGQ7 559 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SLFN11Q7Z7L1 901 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CGRRF1Q99675 332 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM118BQ9BPY3 351 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 HERC2P3Q9BVR0 1158 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 IL25Q9H293 177 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TOR3AQ9H497 397 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 RRN3P2A6NIE6 340 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SNAP29O95721 258 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ALDH1A1P00352 501 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 IL6P05231 212 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 NCAM1P13591 858 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TCF3P15923 654 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 C6orf52Q5T4I8 152 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZNF720Q7Z2F6 126 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TREML1Q86YW5 311 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 WDR49Q8IV35 697 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TCEAL3Q969E4 200 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 APOL5Q9BWW9 433 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 RTFDC1Q9BY42 306 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 LSM7Q9UK45 103 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 DIP2CQ9Y2E4 1556 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PRG3Q9Y2Y8 225 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 PCDHA3Q9Y5H8 950 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TDRD6O60522 2096 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZMYM2Q9UBW7 1377 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 NCANO14594 1321 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZC3H4Q9UPT8 1303 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 CHADO15335 359 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SLC37A4O43826 429 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 RBL1P28749 1068 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ETFBP38117 255 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 GALNTL6Q49A17 601 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TMEM26Q6ZUK4 368 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TMEM139Q8IV31 216 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZNF34Q8IZ26 560 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 DCP1BQ8IZD4 617 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZFP42Q96MM3 310 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 TARS2Q9BW92 718 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 LRRC4BQ9NT99 713 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SPASTQ9UBP0 616 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 DGKBQ9Y6T7 804 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 COL3A1P02461 1466 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 JCADQ9P266 1359 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SYNDIG1LA6NDD5 238 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 RECQL5O94762 991 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 CDH1P12830 882 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 AKAP5P24588 427 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MKRN4PQ13434 485 aaPredicted RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 RRP1BQ14684 758 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 PLA2G4EQ3MJ16 856 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 AADATQ8N5Z0 425 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ATP6V0D2Q8N8Y2 350 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FIG4Q92562 907 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZHX1-C8orf76Q96EF9 292 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 VPS51Q9UID3 782 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MYO5AQ9Y4I1 1855 aaKnown RBP5.77□□□□□ -1.49
VCAN-201ENST00000265077 CPS1P31327 1500 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM92AA1XBS5 289 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PLD2O14939 933 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ICAM1P05362 532 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 NIPAL4Q0D2K0 466 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 SEC23AQ15436 765 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 PAGE2BQ5JRK9 111 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MFSD5Q6N075 450 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAM47BQ8NA70 645 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 FAR1Q8WVX9 515 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 ZNF222Q9UK12 451 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 MAPRE3Q9UPY8 281 aa5.77□□□□□ -1.49
VCAN-201ENST00000265077 CYBBP04839 570 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ATP6AP1LQ52LC2 224 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TNFAIP8L3Q5GJ75 292 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 BICRALQ6AI39 1079 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 DPP10Q8N608 796 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ATG16L2Q8NAA4 619 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SRPK1Q96SB4 655 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 TMEM121Q9BTD3 319 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ARL8BQ9NVJ2 186 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 LNPEPQ9UIQ6 1025 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 INTS1Q8N201 2190 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 J3QRK9 145 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 LDLRP01130 860 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ACLYP53396 1101 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZNF284Q2VY69 593 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 EIF3MQ7L2H7 374 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 OTOAQ7RTW8 1153 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 FBXL8Q96CD0 374 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TLCD1Q96CP7 247 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TMEM176AQ96HP8 235 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms