RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 DYNC1I2Q13409 638 aaKnown RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 DENND6AQ8IWF6 608 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 LGI2Q8N0V4 545 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 TSPAN17Q96FV3 270 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 MRPL46Q9H2W6 279 aaKnown RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 HMX1Q9NP08 348 aaPredicted RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 A8MX80 341 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 HACD1B0YJ81 288 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 WEE1P30291 646 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 FKBP1BP68106 108 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 PRKAA1Q13131 559 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 ITGA7Q13683 1181 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 IMPG1Q17R60 797 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 SLC9B1Q4ZJI4 515 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 MPP4Q96JB8 637 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 QKIQ96PU8 341 aaKnown RBP eCLIP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 TUBGCP5Q96RT8 1024 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 STX16-NPEPL1H3BU86 382 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 GCATO75600 419 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 CYP3A5P20815 502 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 ME2P23368 584 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 NMBRP28336 390 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 MPP1Q00013 466 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 CDC16Q13042 620 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 C6orf10Q5SRN2 563 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 PPP1R15BQ5SWA1 713 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 CDCA2Q69YH5 1023 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 PTRHD1Q6GMV3 140 aaKnown RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 TIGD7Q6NT04 549 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 ZNF786Q8N393 782 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 SKA1Q96BD8 255 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 OXCT2Q9BYC2 517 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 ZNF180Q9UJW8 692 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 UBDO15205 165 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 RENBPP51606 427 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 SLC18A1P54219 525 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 C16orf59Q7L2K0 433 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 SERPINB11Q96P15 392 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 MMADHCQ9H3L0 296 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 CNGB3Q9NQW8 809 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
CSPG5-201ENST00000264723 TRPM5Q9NZQ8 1165 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 VPS28Q9UK41 221 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 BAG5Q9UL15 447 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 CNTN6Q9UQ52 1028 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 LRRC42Q9Y546 428 aa20.09■□□□□ 0.81
CSPG5-201ENST00000264723 VAV1P15498 845 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 BFSP2Q13515 415 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 POLD3Q15054 466 aaPredicted RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 NCBP2-AS2Q69YL0 99 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 ANGPTL8Q6UXH0 198 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 PLD6Q8N2A8 252 aaKnown RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 TOP6BLQ8N6T0 577 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 PNPLA1Q8N8W4 532 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 OR52B2Q96RD2 323 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 FBXO44Q9H4M3 255 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 EML4Q9HC35 981 aaKnown RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 TLR8Q9NR97 1041 aaKnown RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 CD274Q9NZQ7 290 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 SH3BP1Q9Y3L3 701 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 GSTA4O15217 222 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 HDAC3O15379 428 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 MAPK10P53779 464 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 FOLH1Q04609 750 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 SCAMP5Q8TAC9 235 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 JADE3Q92613 823 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 NXNL1Q96CM4 212 aa20.08■□□□□ 0.81
CSPG5-201ENST00000264723 WARS2Q9UGM6 360 aaKnown RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 LSM7Q9UK45 103 aaKnown RBP20.08■□□□□ 0.81
CSPG5-201ENST00000264723 CD151P48509 253 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 RALGDSQ12967 914 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 FRMD7Q6ZUT3 714 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 DDI1Q8WTU0 396 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 APBB2Q92870 758 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 RNF208Q9H0X6 261 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 ABCC13Q9NSE7 274 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 RRN3Q9NYV6 651 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 MOSPD1Q9UJG1 213 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 POMPQ9Y244 141 aa20.08■□□□□ 0.8
CSPG5-201ENST00000264723 ARL5CA6NH57 179 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TPSB2P20231 275 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CDH5P33151 784 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 OXCT1P55809 520 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 INHBEP58166 350 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TPSAB1Q15661 275 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 NOMO2Q5JPE7 1267 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 SCIMPQ6UWF3 145 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 RPS27LQ71UM5 84 aaKnown RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 STRADAQ7RTN6 431 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CCDC138Q96M89 665 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CDH19Q9H159 772 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 NSMCE4AQ9NXX6 385 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TRHDEQ9UKU6 1024 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 SLC8A2Q9UPR5 921 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 E7ESA3 106 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 SRP72O76094 671 aaKnown RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 MPOP05164 745 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms