RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NDRG1Q92597 394 aaKnown RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 AHSPQ9NZD4 102 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 RCOR3Q9P2K3 495 aaPredicted RBP14.16□□□□□ -0.14
CDH3-201ENST00000264012 RBPJLQ9UBG7 517 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 TMCC3Q9ULS5 477 aa14.16□□□□□ -0.14
CDH3-201ENST00000264012 SAC3D1A6NKF1 404 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 MSI1O43347 362 aaKnown RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 IFNA14P01570 189 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 CHRNB2P17787 502 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 S100A5P33763 92 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 CTBP1Q13363 440 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SETMARQ53H47 684 aaPredicted RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 FBXL19Q6PCT2 694 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 IL27RAQ6UWB1 636 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 PRCCQ92733 491 aaPredicted RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 LENG1Q96BZ8 264 aaPredicted RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 TTPALQ9BTX7 342 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SLCO1B3Q9NPD5 702 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 A0A1W2PPM1 405 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 HNRNPCP07910 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDH3-201ENST00000264012 DRD4P21917 467 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 RAB10P61026 200 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 CDK18Q07002 472 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SPIRE1Q08AE8 756 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 PTPRNQ16849 979 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 POTEHQ6S545 545 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 HJURPQ8NCD3 748 aaPredicted RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 FIG4Q92562 907 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 ZNF229Q9UJW7 825 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 COQ4Q9Y3A0 265 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 OR4Q2P0C623 313 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 PTP4A2Q12974 167 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 DUSP4Q13115 394 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 IYDQ6PHW0 289 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 AFTPHQ6ULP2 937 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 TMEM199Q8N511 208 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 ATAD1Q8NBU5 361 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 MAN1A2O60476 641 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 TTPAP49638 278 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 CCT8P50990 548 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 ENPEPQ07075 957 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 HSPA14Q0VDF9 509 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 TARBP2Q15633 366 aaKnown RBP14.15□□□□□ -0.14
CDH3-201ENST00000264012 SLC10A6Q3KNW5 377 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 VSTM1Q6UX27 236 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 PACS1Q6VY07 963 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SUSD6Q92537 303 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 KLHL5Q96PQ7 755 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 SORCS3Q9UPU3 1222 aa14.15□□□□□ -0.14
CDH3-201ENST00000264012 COL1A1P02452 1464 aaPredicted RBP14.15□□□□□ -0.15
CDH3-201ENST00000264012 CLUHO75153 1309 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 KLRG2A4D1S0 409 aaPredicted RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 TULP2O00295 520 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 PTPN3P26045 913 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 GRIA4P48058 902 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 ALDH9A1P49189 494 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TAF10Q12962 218 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 KCNA10Q16322 511 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 SAMD4BQ5PRF9 694 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 RNF43Q68DV7 783 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 APTXQ7Z2E3 356 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 DEFB118Q96PH6 123 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 OMDQ99983 421 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 FZD8Q9H461 694 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 ATP13A3Q9H7F0 1226 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 A0A1W2PQH9 124 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 PSMD12O00232 456 aaPredicted RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 C22orf31O95567 290 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 ADH1AP07327 375 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 RRM2P31350 389 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 RAD23AP54725 363 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 FAM98BQ52LJ0 330 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 CYP2R1Q6VVX0 501 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 PIWIL4Q7Z3Z4 852 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 HIC2Q96JB3 615 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 SNX27Q96L92 541 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 BPIFA1Q9NP55 256 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 SNX15Q9NRS6 342 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 IL1RAPL1Q9NZN1 696 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 STXBP5LQ9Y2K9 1186 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TDRKHQ9Y2W6 561 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 TBC1D3BA6NDS4 549 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 RGS14O43566 566 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 LBPP18428 481 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 CYP3A5P20815 502 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 CREMQ03060 361 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TGM3Q08188 693 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 PWP1Q13610 501 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TEX44Q53QW1 395 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TTC27Q6P3X3 843 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TRAPPC5Q8IUR0 188 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 TNS4Q8IZW8 715 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 FAM124BQ9H5Z6 455 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms