RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HYAL3O43820 417 aaPredicted RBP16.38■□□□□ 0.21
USE1-201ENST00000263897 CREB3O43889 395 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 SKILP12757 684 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 DESP17661 470 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 CCT8P50990 548 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 SETMARQ53H47 684 aaPredicted RBP16.38■□□□□ 0.21
USE1-201ENST00000263897 PRAMEF14Q5SWL7 426 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 RTL3Q8N8U3 475 aaKnown RBP16.38■□□□□ 0.21
USE1-201ENST00000263897 BAHD1Q8TBE0 780 aaPredicted RBP16.38■□□□□ 0.21
USE1-201ENST00000263897 GRIN3AQ8TCU5 1115 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 CDC6Q99741 560 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 NOL6Q9H6R4 1146 aaKnown RBP16.38■□□□□ 0.21
USE1-201ENST00000263897 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
USE1-201ENST00000263897 TP53BP1Q12888 1972 aaPredicted RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 TRPM6Q9BX84 2022 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 PRAMEF26H0Y7S4 382 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 PTMSP20962 102 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 PSMA2P25787 234 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 PBX1P40424 430 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 CCNHP51946 323 aaPredicted RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 UBASH3AP57075 661 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 YBEYP58557 167 aaPredicted RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 STAT4Q14765 748 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 LEKR1Q6ZMV7 388 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 SLCO6A1Q86UG4 719 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 IQCHQ86VS3 1027 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 CHCHD4Q8N4Q1 142 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 ARFGAP1Q8N6T3 406 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 PPP1R16AQ96I34 528 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 ELF4Q99607 663 aaPredicted RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 EPAS1Q99814 870 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 GDF3Q9NR23 364 aa16.37■□□□□ 0.21
USE1-201ENST00000263897 APOBEC2Q9Y235 224 aaKnown RBP16.37■□□□□ 0.21
USE1-201ENST00000263897 A0A1W2PQJ5 194 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 A0A1W2PQU0 124 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 FAM221BA6H8Z2 402 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 ZSCAN5CA6NGD5 496 aaPredicted RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 ATMINO43313 823 aaPredicted RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 BUB1O43683 1085 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 POP4O95707 220 aaKnown RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 ITGB7P26010 798 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 NXPH1P58417 271 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 OVGP1Q12889 678 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 RAB44Q7Z6P3 723 aaPredicted RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 HORMAD1Q86X24 394 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 OR2AP1Q8NGE2 309 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 ADAMTS14Q8WXS8 1223 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 SYN2Q92777 582 aaPredicted RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 TM6SF2Q9BZW4 377 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 ISCUQ9H1K1 167 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 CATSPERBQ9H7T0 1116 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 ERVMER34-1Q9H9K5 563 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
USE1-201ENST00000263897 NEUROG3Q9Y4Z2 214 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 USP24Q9UPU5 2620 aa16.36■□□□□ 0.21
USE1-201ENST00000263897 KMT2BQ9UMN6 2715 aaPredicted RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 RASA4BC9J798 803 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 GOLGA6L19H0YKK7 550 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 SLC31A1O15431 190 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 FGF10O15520 208 aaPredicted RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 RASA4O43374 803 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 MAGEC1O60732 1142 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 RNF8O76064 485 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 PCDH8O95206 1070 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 GSRP00390 522 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 ADRB3P13945 408 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 HTR7P34969 479 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 GRK6P43250 576 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 NEK3P51956 506 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 SNRPD1P62314 119 aaKnown RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 IL9RQ01113 521 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 SERINC3Q13530 473 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 SHBQ15464 509 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 ZNF284Q2VY69 593 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 MYLK3Q32MK0 819 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 INO80DQ53TQ3 878 aaPredicted RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 ERMARDQ5T6L9 678 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 HGSNATQ68CP4 663 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 FBXL19Q6PCT2 694 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 SPATS2Q86XZ4 545 aaKnown RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 RYBPQ8N488 228 aaPredicted RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 PNPLA1Q8N8W4 532 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 KLK6Q92876 244 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 KLC2Q9H0B6 622 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 ZDHHC6Q9H6R6 413 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 GPATCH2LQ9NWQ4 482 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 PCSK1NQ9UHG2 260 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 AP4E1Q9UPM8 1137 aa16.35■□□□□ 0.21
USE1-201ENST00000263897 ZFR2Q9UPR6 939 aaKnown RBP16.35■□□□□ 0.21
USE1-201ENST00000263897 MSRB2Q9Y3D2 182 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms