RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 HLTFQ14527 1009 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FAM153CQ494X1 144 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 RNASEH2BQ5TBB1 312 aaKnown RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TMCO4Q5TGY1 634 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 GRAMD4Q6IC98 578 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 KDELC2Q7Z4H8 507 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 PHTF2Q8N3S3 785 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TEX26Q8N6G2 289 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 DCAF4L2Q8NA75 395 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FBXO25Q8TCJ0 367 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 NSMCE1Q8WV22 266 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 LRRC45Q96CN5 670 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 OXNAD1Q96HP4 312 aaPredicted RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 GDAP1L1Q96MZ0 367 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 RBM15Q96T37 977 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FERMT1Q9BQL6 677 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 MLPHQ9BV36 600 aaPredicted RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 C2orf49Q9BVC5 232 aaPredicted RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 SLC2A11Q9BYW1 496 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 CIPCQ9C0C6 399 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 GLOD4Q9HC38 313 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 ZDHHC4Q9NPG8 344 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FAM114A2Q9NRY5 505 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 DEC1Q9P2X7 70 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FAM153AQ9UHL3 310 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TRHDEQ9UKU6 1024 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TPX2Q9ULW0 747 aaKnown RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 ATP8A1Q9Y2Q0 1164 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 ANKRD36A6QL64 1941 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TMEM63AO94886 807 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 SRCP12931 536 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 POLR2EP19388 210 aaKnown RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ITIH2P19823 946 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 GRIA1P42261 906 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 GALK1P51570 392 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 DRG2P55039 364 aaKnown RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 SLC12A1Q13621 1099 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ZNF235Q14590 738 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 KCNJ11Q14654 390 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 PARP6Q2NL67 630 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 DGKKQ5KSL6 1271 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ATXN7L2Q5T6C5 722 aaPredicted RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 HIBCHQ6NVY1 386 aaPredicted RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 TXNDC11Q6PKC3 985 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ZNF366Q8N895 744 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ATP11CQ8NB49 1132 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 CSGALNACT1Q8TDX6 532 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ART4Q93070 314 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 FATE1Q969F0 183 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ERLEC1Q96DZ1 483 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ZNF599Q96NL3 588 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 VAT1Q99536 393 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 CINPQ9BW66 212 aaPredicted RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 TM6SF2Q9BZW4 377 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 GBA3Q9H227 469 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 TNKS2Q9H2K2 1166 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 MTG2Q9H4K7 406 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 HEBP1Q9NRV9 189 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 ZDHHC18Q9NUE0 388 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 PIH1D1Q9NWS0 290 aaKnown RBP9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 WHRNQ9P202 907 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 IGSF9Q9P2J2 1179 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 LHX3Q9UBR4 397 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 RAB21Q9UL25 225 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 COL6A3P12111 3177 aa9.89□□□□□ -0.83
SNRNP40-201ENST00000263694 COL4A2P08572 1712 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 TBC1D3BA6NDS4 549 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 E7EVH7 732 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 INSIG1O15503 277 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 BNIP3LO60238 219 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 USP12O75317 370 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 AVILO75366 819 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 PMPCBO75439 489 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 BANF1O75531 89 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ZNF821O75541 412 aaPredicted RBP9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 APRTP07741 180 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 MMP2P08253 660 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 BMP1P13497 986 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 GKP32189 559 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 CD86P42081 329 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 SCNN1BP51168 640 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ECT2LQ008S8 904 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ACCSLQ4AC99 568 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 HP1BP3Q5SSJ5 553 aaPredicted RBP9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 EMC10Q5UCC4 262 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ITPRIPL1Q6GPH6 555 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 WDR93Q6P2C0 686 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 PRPF39Q86UA1 669 aaKnown RBP9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 PPIL6Q8IXY8 311 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 AHI1Q8N157 1196 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 NAT8LQ8N9F0 302 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 OR6K2Q8NGY2 324 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ARRDC2Q8TBH0 407 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 CCHCR1Q8TD31 782 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 PRCCQ92733 491 aaPredicted RBP9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 TTC17Q96AE7 1141 aa9.88□□□□□ -0.83
SNRNP40-201ENST00000263694 ACDQ96AP0 544 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms