RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SPIRE1Q08AE8 756 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 NUDT14O95848 222 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ABHD2P08910 425 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 TNNI3P19429 210 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 KDELR1P24390 212 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ERVK-9P63128 1117 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 PCBP1Q15365 356 aaKnown RBP eCLIP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 CCDC36Q8IYA8 594 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 CEP41Q9BYV8 373 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 SEMA6AQ9H2E6 1030 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 TUBA8Q9NY65 449 aaPredicted RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 SAMD7Q7Z3H4 446 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 SYT12Q8IV01 421 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 SYTL5Q8TDW5 730 aaPredicted RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 CD101Q93033 1021 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 UNKQ9C0B0 810 aaKnown RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 EHD3Q9NZN3 535 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 UNC5CO95185 931 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 MYLPFQ96A32 169 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 TKTL2Q9H0I9 626 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 HAVCR1Q96D42 359 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 CCDC162PA2VCL2 907 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 COX7A2P14406 83 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 GSTT1P30711 240 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 NTSP30990 170 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 CAMKK1Q8N5S9 505 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF655Q8N720 491 aaPredicted RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 TPH1P17752 444 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 RHAGQ02094 409 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 FCHO2Q0JRZ9 810 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 KCNK1O00180 336 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 MGRN1O60291 552 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 MAGEC1O60732 1142 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 AMPD1P23109 780 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 SERPINA4P29622 427 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 FMO4P31512 558 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 PTDSS1P48651 473 aaKnown RBP17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 AKIRIN2Q53H80 203 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 PAGE2Q7Z2X7 111 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 AGXT2Q9BYV1 514 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 ATP13A1Q9HD20 1204 aa17.66■□□□□ 0.42
NOTCH3-201ENST00000263388 UMPSP11172 480 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 NOS2P35228 1153 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 COPZ1P61923 177 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ITGADQ13349 1161 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 IRAK1BP1Q5VVH5 260 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ERGIC3Q9Y282 383 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 MTF2Q9Y483 593 aaPredicted RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SERPINA6P08185 405 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ELF3P78545 371 aaPredicted RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SPIDRQ14159 915 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SPATA20Q8TB22 786 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC2A14Q8TDB8 520 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ATL1Q8WXF7 558 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ADARB2Q9NS39 739 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ETAA1Q9NY74 926 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM205AQ6ZU69 1335 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 TMEM131LA2VDJ0 1609 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 MYOM1P52179 1685 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ACKR2O00590 384 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 AHCYL1O43865 530 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 OSBPL11Q9BXB4 747 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 DSN1Q9H410 356 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SPTLC1O15269 473 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 LCA5LO95447 670 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 BIKQ13323 160 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ITPK1Q13572 414 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 CRY1Q16526 586 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ZCCHC23Q6ZST2 131 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 PHF10Q8WUB8 498 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 NEK6Q9HC98 313 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM50BQ9Y247 325 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 CLK2P49760 499 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 CDC42P60953 191 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 DGCR6Q14129 220 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 ERN1O75460 977 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 PRG2P13727 222 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 INSRRP14616 1297 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 CXCR2P25025 360 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 NKX2-3Q8TAU0 364 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 RSL24D1Q9UHA3 163 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 KHDRBS3O75525 346 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 PIGNO95427 931 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 LTA4HP09960 611 aaKnown RBP17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 TAF13Q15543 124 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 MAPKAPK3Q16644 382 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 TTC23Q5W5X9 447 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 NEK5Q6P3R8 708 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 CERS2Q96G23 380 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 SPG21Q9NZD8 308 aa17.65■□□□□ 0.42
NOTCH3-201ENST00000263388 LIPMQ5VYY2 423 aa17.64■□□□□ 0.42
NOTCH3-201ENST00000263388 RNF148Q8N7C7 305 aa17.64■□□□□ 0.42
NOTCH3-201ENST00000263388 AHCYL2Q96HN2 611 aaKnown RBP17.64■□□□□ 0.42
NOTCH3-201ENST00000263388 TSHRP16473 764 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms