RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF554Q86TJ5 538 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 AHI1Q8N157 1196 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CDYL2Q8N8U2 506 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 APBB2Q92870 758 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CERS2Q96G23 380 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 QKIQ96PU8 341 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■□ 26.2
SMG6-201ENST00000263073 TOR3AQ9H497 397 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 TRIM38O00635 465 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 AKR1D1P51857 326 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 FMO1Q01740 532 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 GCNT1Q02742 428 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MED22Q15528 200 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SATL1Q86VE3 508 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ADHFE1Q8IWW8 467 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ALG3Q92685 438 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 DLG3Q92796 817 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 VPS35Q96QK1 796 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CATSPERZQ9NTU4 200 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ARL15Q9NXU5 204 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
SMG6-201ENST00000263073 SLC25A27O95847 323 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
SMG6-201ENST00000263073 HGFP14210 728 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 EPORP19235 508 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 PPP2R1BP30154 601 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CDK7P50613 346 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SLC1A5Q15758 541 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 PAGE2Q7Z2X7 111 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SLCO6A1Q86UG4 719 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SPPL2CQ8IUH8 684 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG6-201ENST00000263073 NMUR2Q9GZQ4 415 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 OPTCQ9UBM4 332 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MAP3K13O43283 966 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 TMCC2O75069 709 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 SERPINA6P08185 405 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MPSTP25325 297 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CDH13P55290 713 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 FASTKD3Q14CZ7 662 aaKnown RBP12.19□□□□□ -0.46
SMG6-201ENST00000263073 RFX4Q33E94 735 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 RFWD3Q6PCD5 774 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MTSS1LQ765P7 747 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 DSG4Q86SJ6 1040 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 GPR156Q8NFN8 814 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MROH8Q9H579 483 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 KCNQ5Q9NR82 932 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 ZNHIT2Q9UHR6 403 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 BCLAF3A2AJT9 711 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 CHADO15335 359 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 GSC2O15499 205 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 FBXO21O94952 628 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 UQCRBP14927 111 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 GOT1P17174 413 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 TFEBP19484 476 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 CYP2A7P20853 494 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 NR2C2P49116 596 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 MSLNQ13421 630 aaPredicted RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 SQLEQ14534 574 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 LRRC55Q6ZSA7 311 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 UBE2J2Q8N2K1 259 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 FGFBP2Q9BYJ0 223 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 ULBP1Q9BZM6 244 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 BCL2L14Q9BZR8 327 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 DDX4Q9NQI0 724 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMG6-201ENST00000263073 HES2Q9Y543 173 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 LTA4HP09960 611 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 ANXA11P50995 505 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 ZNF484Q5JVG2 852 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 DENND6AQ8IWF6 608 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 FITM2Q8N6M3 262 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 CLHC1Q8NHS4 586 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 PROX1Q92786 737 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 COL26A1Q96A83 441 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 SNRNP25Q9BV90 132 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 ABCB9Q9NP78 766 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 PCDH8O95206 1070 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 NADKO95544 446 aaPredicted RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 ITGA2BP08514 1039 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 HNF4AP41235 474 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 MAD2L1Q13257 205 aaPredicted RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 CRY1Q16526 586 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 MREGQ8N565 214 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 DNAJC1Q96KC8 554 aaKnown RBP12.18□□□□□ -0.46
SMG6-201ENST00000263073 SNX15Q9NRS6 342 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 RASSF1Q9NS23 344 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
SMG6-201ENST00000263073 NUDT14O95848 222 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms