RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TBKBP1A7MCY6 615 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 SLC22A2O15244 555 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 TRIM13O60858 407 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 USP1O94782 785 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 FSBPO95073 299 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 POMCP01189 267 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 BDNFP23560 247 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ATP13A4Q4VNC1 1196 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 C2CD6Q53TS8 623 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 RNF43Q68DV7 783 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 PDE12Q6L8Q7 609 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 SEC16BQ96JE7 1060 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 FEM1CQ96JP0 617 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 FCRL2Q96LA5 508 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 EML4Q9HC35 981 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 NCKIPSDQ9NZQ3 722 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MSRAQ9UJ68 235 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ILVBLA1L0T0 632 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ZW10O43264 779 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 DYRK3O43781 588 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 LZTS3O60299 673 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 LRIG2O94898 1065 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 TKTP29401 623 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 CDH4P55283 916 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 CDH18Q13634 790 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 NECAB2Q7Z6G3 386 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 NRBF2Q96F24 287 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ATXN7L3BQ96GX2 97 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 CCT7Q99832 543 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 OSBPL10Q9BXB5 764 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ECT2Q9H8V3 914 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MTRRQ9UBK8 725 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 C2orf81A6NN90 581 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 KCNU1A8MYU2 1149 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 TMEM114B3SHH9 223 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 CKBP12277 381 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 NDUFV1P49821 464 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 SULT2A1Q06520 285 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 PCSK7Q16549 785 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 SLC39A12Q504Y0 691 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 EXOC3L1Q86VI1 746 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 PQLC3Q8N755 202 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ERLEC1Q96DZ1 483 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ELAC2Q9BQ52 826 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 GBA3Q9H227 469 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MANSC1Q9H8J5 431 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 AGO3Q9H9G7 860 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MRPL17Q9NRX2 175 aaKnown RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 THAP1Q9NVV9 213 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MBL2P11226 248 aaPredicted RBP8.35□□□□□ -1.07
PTPN3-201ENST00000262539 FGFR3P22607 806 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 SLC5A3P53794 718 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 TAC4Q86UU9 113 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 OSTM1Q86WC4 334 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 CD99L2Q8TCZ2 262 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 ARHGEF38Q9NXL2 777 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 PKP3Q9Y446 797 aa8.35□□□□□ -1.07
PTPN3-201ENST00000262539 MYBPHLA2RUH7 354 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 RHOCP08134 193 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 ESRRGP62508 458 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 FASTKD1Q53R41 847 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 IL12RB2Q99665 862 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EXO5Q9H790 373 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 KLHL11Q9NVR0 708 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 GPATCH2LQ9NWQ4 482 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 UBA2Q9UBT2 640 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 CHORDC1Q9UHD1 332 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 AP3M1Q9Y2T2 418 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SLC30A1Q9Y6M5 507 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SCN4AP35499 1836 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 ACSL4O60488 711 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EDF1O60869 148 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 POU4F1Q01851 419 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 MGAT3Q09327 533 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EPS8L3Q8TE67 593 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 RNF39Q9H2S5 420 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 RUBCNLQ9H714 662 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 ZC4H2Q9NQZ6 224 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 THEGQ9P2T0 379 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 A0A1W2PQ45 241 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 A0A1W2PQY0 241 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 TCRBV9S1A1TA0A576 114 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 STX7O15400 261 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 TLR5O60602 858 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 PQBP1O60828 265 aaKnown RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 WEE1P30291 646 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 CLCNKBP51801 687 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EFTUD2Q15029 972 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 NEPROQ6NW34 567 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 FBXO46Q6PJ61 603 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-201ENST00000262539 HTATIP2Q9BUP3 242 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 TTLL2Q9BWV7 592 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 ARNT2Q9HBZ2 717 aa8.34□□□□□ -1.07
PTPN3-201ENST00000262539 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms