RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 APOFQ13790 326 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 ZC3HC1Q86WB0 502 aaKnown RBP18.22■□□□□ 0.51
TRAF4-201ENST00000262395 NT5DC4Q86YG4 428 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 CATSPER1Q8NEC5 780 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 TMEM79Q9BSE2 394 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 ZNF385DQ9H6B1 395 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 PRDM16Q9HAZ2 1276 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 CASS4Q9NQ75 786 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 AP4S1Q9Y587 144 aa18.22■□□□□ 0.51
TRAF4-201ENST00000262395 DDHD2O94830 711 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CKMT2P17540 419 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CDH2P19022 906 aaPredicted RBP18.21■□□□□ 0.51
TRAF4-201ENST00000262395 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 ARHGAP17Q68EM7 881 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 PPWD1Q96BP3 646 aaKnown RBP18.21■□□□□ 0.51
TRAF4-201ENST00000262395 NOL11Q9H8H0 719 aaKnown RBP18.21■□□□□ 0.51
TRAF4-201ENST00000262395 TNFRSF12AQ9NP84 129 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CACNG4Q9UBN1 327 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 DCLK1O15075 740 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 IMPDH2P12268 514 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 TSPAN8P19075 237 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CYP2B6P20813 491 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 NR1H2P55055 460 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 DPYSQ14117 519 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 C9orf57Q5W0N0 161 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 LRRC8EQ6NSJ5 796 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 MFSD6LQ8IWD5 586 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 AFG1LQ8WV93 481 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 PLEKHG4BQ96PX9 1271 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 NFKBIZQ9BYH8 718 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CDHR5Q9HBB8 845 aa18.21■□□□□ 0.51
TRAF4-201ENST00000262395 CROCCQ5TZA2 2017 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 PGK1P00558 417 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 TPI1P60174 286 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 PPIDQ08752 370 aaKnown RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 TSTD2Q5T7W7 516 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 CNSTQ6PJW8 725 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 NUP93Q8N1F7 819 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 CPSF7Q8N684 471 aaKnown RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 KDM1BQ8NB78 822 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 GAB3Q8WWW8 586 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 LPGAT1Q92604 370 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 HSPBAP1Q96EW2 488 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 PCDHGA7Q9Y5G6 932 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 ARHGAP10A1A4S6 786 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 C9IYK1 514 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 NRP1O14786 923 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 FOXD2O60548 495 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 USP2O75604 605 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 CABYRO75952 493 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 STAU1O95793 577 aaKnown RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 ADARP55265 1226 aaKnown RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 SH3BGRP55822 239 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 GJA9P57773 515 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 KCTD2Q14681 263 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 AGKQ53H12 422 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 ACBD5Q5T8D3 534 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 DIS3LQ8TF46 1054 aaKnown RBP18.2■□□□□ 0.5
TRAF4-201ENST00000262395 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 BCAP29Q9UHQ4 241 aa18.2■□□□□ 0.5
TRAF4-201ENST00000262395 ATP6AP2A0A1C7CYW4 349 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 PDLIM1O00151 329 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 TRIM38O00635 465 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 ATP6AP2O75787 350 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 MT-CYBP00156 380 aaPredicted RBP18.19■□□□□ 0.5
TRAF4-201ENST00000262395 CYP2C8P10632 490 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 GRM5P41594 1212 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 PAFAH1B3Q15102 231 aaKnown RBP18.19■□□□□ 0.5
TRAF4-201ENST00000262395 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 BEST2Q8NFU1 509 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 OR9I1Q8NGQ6 314 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 STYXQ8WUJ0 223 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 GPR22Q99680 433 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 POMKQ9H5K3 350 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SFMBT1Q9UHJ3 866 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 TTC36A6NLP5 189 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SDHDO14521 159 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 ATP6V1G1O75348 118 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 TIPRLO75663 272 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 CNMDO75829 334 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 RPS12P25398 132 aaKnown RBP18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SLC26A2P50443 739 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 NME5P56597 212 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 MAP3K7CLP57077 242 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 FBXO47Q5MNV8 452 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 TXNDC5Q8NBS9 432 aaKnown RBP18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SLC2A11Q9BYW1 496 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 IL1RL2Q9HB29 575 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 LRRC4Q9HBW1 653 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 CHST12Q9NRB3 414 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SLC2A6Q9UGQ3 507 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 ACOT9Q9Y305 439 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 PRORSD1PA6NEY8 169 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 H2AFYO75367 372 aaKnown RBP18.19■□□□□ 0.5
TRAF4-201ENST00000262395 SOX11P35716 441 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 ETFBP38117 255 aa18.19■□□□□ 0.5
TRAF4-201ENST00000262395 STT3AP46977 705 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms