RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SIKE1Q9BRV8 207 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 PLK2Q9NYY3 685 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 ADAM28Q9UKQ2 775 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 M0QZ92 97 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 F9P00740 461 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 PMLP29590 882 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 SERPINB8P50452 374 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 UPP1Q16831 310 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 RABGAP1LQ5R372 815 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 TAC4Q86UU9 113 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 WDR75Q8IWA0 830 aaKnown RBP22.94■■□□□ 1.26
MCF2L-201ENST00000261963 PLD6Q8N2A8 252 aaKnown RBP22.94■■□□□ 1.26
MCF2L-201ENST00000261963 APOL2Q9BQE5 337 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 GRIP2Q9C0E4 1043 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 SENP6Q9GZR1 1112 aaPredicted RBP22.94■■□□□ 1.26
MCF2L-201ENST00000261963 TRHDEQ9UKU6 1024 aa22.94■■□□□ 1.26
MCF2L-201ENST00000261963 NUP205Q92621 2012 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 CAPN8A6NHC0 703 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 COPAP53621 1224 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 PM20D1Q6GTS8 502 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 GDF6Q6KF10 455 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 FSTL4Q6MZW2 842 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 DUS1LQ6P1R4 473 aaKnown RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 RNF168Q8IYW5 571 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 LRRC43Q8N309 656 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 GFM2Q969S9 779 aaKnown RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 CCDC124Q96CT7 223 aaKnown RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 INPP5FQ9Y2H2 1132 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 ERI2A8K979 691 aaKnown RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 MTSS1O43312 755 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 SORBS2O94875 1100 aaKnown RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 KLHL2O95198 593 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 SPRP35270 261 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 ABCG1P45844 678 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 EMP3P54852 163 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 TAF1CQ15572 869 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 MYLK3Q32MK0 819 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 OGFRL1Q5TC84 451 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 TRPV1Q8NER1 839 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 CEP70Q8NHQ1 597 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 ACTRT2Q8TDY3 377 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 TEKT5Q96M29 485 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 PNPOQ9NVS9 261 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 CDH22Q9UJ99 828 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 MAGED2Q9UNF1 606 aaPredicted RBP22.93■■□□□ 1.26
MCF2L-201ENST00000261963 GIT1Q9Y2X7 761 aa22.93■■□□□ 1.26
MCF2L-201ENST00000261963 PCSK1P29120 753 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 MAGEA10P43363 369 aaPredicted RBP22.92■■□□□ 1.26
MCF2L-201ENST00000261963 ALDH1A3P47895 512 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 POU5F2Q8N7G0 328 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 CELF6Q96J87 481 aaKnown RBP22.92■■□□□ 1.26
MCF2L-201ENST00000261963 APBA2Q99767 749 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 AGO3Q9H9G7 860 aaKnown RBP22.92■■□□□ 1.26
MCF2L-201ENST00000261963 CHST12Q9NRB3 414 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 POMPQ9Y244 141 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 GRK2P25098 689 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 BTKQ06187 659 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 ITPRIPL1Q6GPH6 555 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 MCMBPQ9BTE3 642 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 CHRAC1Q9NRG0 131 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 TMLHEQ9NVH6 421 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 UBP1Q9NZI7 540 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 NEU3Q9UQ49 428 aa22.92■■□□□ 1.26
MCF2L-201ENST00000261963 JCHAINP01591 159 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 RALBP11234 206 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 ATP6V1B1P15313 513 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 TPH1P17752 444 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 BDNFP23560 247 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 RPL9P32969 192 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 DLG2Q15700 870 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 FAM171BQ6P995 826 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 C17orf99Q6UX52 265 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CXCL17Q6UXB2 119 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 TNS4Q8IZW8 715 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 ZBTB8BQ8NAP8 495 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 SNRNP27Q8WVK2 155 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 DCUN1D1Q96GG9 259 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 STN1Q9H668 368 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CAB39LQ9H9S4 337 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 UBAP1Q9NZ09 502 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 COL4A4P53420 1690 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 ZNF195O14628 629 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 TNFAIP8O95379 198 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 AKR1A1P14550 325 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CPA3P15088 417 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 HARS2P49590 506 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 ZNF135P52742 658 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CBX3Q13185 183 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 PAN2Q504Q3 1202 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CLEC14AQ86T13 490 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CNTD1Q8N815 330 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 ACVR1CQ8NER5 493 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 DQX1Q8TE96 717 aaKnown RBP22.91■■□□□ 1.26
MCF2L-201ENST00000261963 VAT1Q99536 393 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 THEGQ9P2T0 379 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 CEP350Q5VT06 3117 aa22.91■■□□□ 1.26
MCF2L-201ENST00000261963 H3BNX3 289 aa22.9■■□□□ 1.26
MCF2L-201ENST00000261963 DNAJA2O60884 412 aa22.9■■□□□ 1.26
MCF2L-201ENST00000261963 NPY2RP49146 381 aa22.9■■□□□ 1.26
MCF2L-201ENST00000261963 CLCN2P51788 898 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms