RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 FTHL17Q9BXU8 183 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 WDR41Q9HAD4 459 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 CHST12Q9NRB3 414 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 PSMD13Q9UNM6 376 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 NOD1Q9Y239 953 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 LZTS1Q9Y250 596 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 AP4B1Q9Y6B7 739 aa14.7□□□□□ -0.06
SFSWAP-201ENST00000261674 PLXNB2O15031 1838 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 ZCWPW2A0A1B0GU75 182 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 MT-CYBP00156 380 aaPredicted RBP14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 HDCP19113 662 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 PSEN2P49810 448 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 ZBTB17Q13105 803 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 WSCD1Q658N2 575 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 CYS1Q717R9 158 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 UNC93AQ86WB7 457 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 NPWQ8N729 165 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 WNT8BQ93098 351 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 YJEFN3A6XGL0 299 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 TSPAN8P19075 237 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 NOS2P35228 1153 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 ADRA1BP35368 520 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 RPS6KA3P51812 740 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 DYNC1I2Q13409 638 aaKnown RBP14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 KYAT1Q16773 422 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 CYP2R1Q6VVX0 501 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 PDZD4Q76G19 769 aaPredicted RBP14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 ADGRG6Q86SQ4 1221 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 TMEM40Q8WWA1 233 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 NFKBIZQ9BYH8 718 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 XPR1Q9UBH6 696 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 STK39Q9UEW8 545 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 CDYLQ9Y232 598 aa14.69□□□□□ -0.06
SFSWAP-201ENST00000261674 AP2A1O95782 977 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 SOX11P35716 441 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 MPP1Q00013 466 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 SOX4Q06945 474 aaPredicted RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 CEACAM7Q14002 265 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 HNRNPDQ14103 355 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 MAP7Q14244 749 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 ARHGAP17Q68EM7 881 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 C16orf89Q6UX73 402 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 OSTM1Q86WC4 334 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 FSTL5Q8N475 847 aaPredicted RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 B4GALNT2Q8NHY0 566 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 RNF217Q8TC41 542 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 NXNL1Q96CM4 212 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 TNIP3Q96KP6 325 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 SNX27Q96L92 541 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 HSFY1Q96LI6 401 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 C11orf84Q9BUA3 381 aaPredicted RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 PCDHAC1Q9H158 963 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 UBAP1Q9NZ09 502 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 PMPCBO75439 489 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 GLUD2P49448 558 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 GK5Q6ZS86 529 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 EME1Q96AY2 570 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 ZFP42Q96MM3 310 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 PKP2Q99959 881 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 OXSMQ9NWU1 459 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 UBQLN1Q9UMX0 589 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 ANK1P16157 1881 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 MATN2O00339 956 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 TIMM44O43615 452 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 TAF6P49848 677 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 SH2D4BQ5SQS7 431 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 NOTUMQ6P988 496 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 PPWD1Q96BP3 646 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 Q9H521 79 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 PLEKHA5Q9HAU0 1116 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 RAP2CQ9Y3L5 183 aa14.68□□□□□ -0.06
SFSWAP-201ENST00000261674 DNAJA2O60884 412 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CRTAMO95727 393 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CYBAP13498 195 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CD68P34810 354 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CPT1AP50416 773 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 SLC12A2P55011 1212 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 LRRC23Q53EV4 343 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ATP6V1E2Q96A05 226 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 PHF21BQ96EK2 531 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 DEFB118Q96PH6 123 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 MLPHQ9BV36 600 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CCDC167Q9P0B6 97 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 CEP290O15078 2479 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 A0A0G2JMZ2 1700 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ATP6AP2A0A1C7CYW4 349 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 FKTNO75072 461 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ATP6AP2O75787 350 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 AHSGP02765 367 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 MPOP05164 745 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ME2P23368 584 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 NME5P56597 212 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 PURAQ00577 322 aaKnown RBP14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 RALGDSQ12967 914 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 DCAF4L1Q3SXM0 396 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ARHGAP22Q7Z5H3 698 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms