RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FAM45AQ8TCE6 357 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MYOCQ99972 504 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SIKE1Q9BRV8 207 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MFSD1Q9H3U5 465 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 GNPTGQ9UJJ9 305 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 DNMT3LQ9UJW3 386 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NPR3P17342 541 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NOS2P35228 1153 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 PTSQ03393 145 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SNRNP25Q9BV90 132 aaKnown RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ZFP14Q9HCL3 533 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MKL2Q9ULH7 1088 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 OR6B1O95007 311 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 CHKAP35790 457 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 PRKAA2P54646 552 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TBX2Q13207 712 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 C16orf72Q14CZ0 275 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NT5DC1Q5TFE4 455 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 IQSEC1Q6DN90 963 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MTMR9Q96QG7 549 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NDUFS2O75306 463 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SPATA31D3P0C874 917 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF37AP17032 561 aaPredicted RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 GSTM5P46439 218 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 POLR2LP62875 67 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 ABRQ12979 859 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 DGCR6Q14129 220 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 UBAP2LQ14157 1087 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 CNSTQ6PJW8 725 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SPATA31D4Q6ZUB0 917 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 COLGALT2Q8IYK4 626 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 MBOAT7Q96N66 472 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 MIR1-1HGQ9H1L0 117 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 ATXN2Q99700 1313 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 ATP5BP06576 529 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 GOT1P17174 413 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 FRG1Q14331 258 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 NEPROQ6NW34 567 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 UNC5AQ6ZN44 842 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 CREG2Q8IUH2 290 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 RORBQ92753 470 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 MLPHQ9BV36 600 aaPredicted RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 STK39Q9UEW8 545 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SLC12A4Q9UP95 1085 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 LIASO43766 372 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 PIK3R1P27986 724 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 GPR1P46091 355 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 THOP1P52888 689 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SLC25A3Q00325 362 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 NAB1Q13506 487 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 PLA2G4EQ3MJ16 856 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 GPAT3Q53EU6 434 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 LENG9Q96B70 501 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 PAIP1Q9H074 479 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 RAD21L1Q9H4I0 556 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 A0A0A0MRY4 1105 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SIGLEC16A6NMB1 481 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 CHADO15335 359 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 B4GALT5O43286 388 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SASH3O75995 380 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 FGRP09769 529 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 FAM84AQ96KN4 292 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 SPATA13Q96N96 652 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 BTBD9Q96Q07 612 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 NOL6Q9H6R4 1146 aaKnown RBP12.23□□□□□ -0.45
COL8A1-201ENST00000261037 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
COL8A1-201ENST00000261037 FGF10O15520 208 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CYP1A2P05177 515 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CCNB1P14635 433 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 AMD1P17707 334 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CTNNB1P35222 781 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 TRAF3Q13114 568 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ZIK1Q3SY52 487 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 PAGE2BQ5JRK9 111 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 EMID1Q96A84 441 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 TMEM134Q9H6X4 195 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 EFCAB10A6NFE3 127 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 HECTD3Q5T447 861 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 MOB2Q70IA6 237 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 C12orf29Q8N999 325 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 MARCKSL1P49006 195 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 MTA1Q13330 715 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 HYIQ5T013 277 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 FAM124AQ86V42 546 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 PARP8Q8N3A8 854 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 DNAJC1Q96KC8 554 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms