RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ALPLP05186 524 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A15PP0C7V4 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A14PP0C7W9 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 HSPA1AP0DMV8 641 aaKnown RBP5.35□□□□□ -1.55
TRA2B-201ENST00000259043 HSPA1BP0DMV9 641 aaKnown RBP5.35□□□□□ -1.55
TRA2B-201ENST00000259043 CYP3A7P24462 503 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 CHKAP35790 457 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 CCDC38Q502W7 563 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 NUGGCQ68CJ6 796 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 NRSN1Q8IZ57 195 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 ZNF527Q8NB42 609 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 STYXQ8WUJ0 223 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 CLMNQ96JQ2 1002 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 ISCA1Q9BUE6 129 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 ANAPC4Q9UJX5 808 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 NFU1Q9UMS0 254 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 GTF2A1LQ9UNN4 478 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 LAMP3Q9UQV4 416 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 SBF1O95248 1867 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 TIAM2Q8IVF5 1701 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 KCPQ6ZWJ8 1503 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 C10orf71Q711Q0 1435 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 RAB3GAP2Q9H2M9 1393 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 GOLGA6L3A6NEY3 463 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 C3orf70A6NLC5 250 aaPredicted RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 KIF28PB7ZC32 967 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 SKAP2O75563 359 aaPredicted RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 ALDOAP04075 364 aaKnown RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 CHRNB1P11230 501 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 HOXB2P14652 356 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 HTR6P50406 440 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 SPARCL1Q14515 664 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 PUM3Q15397 648 aaKnown RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 CCDC174Q6PII3 467 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MDGA2Q7Z553 956 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 ADPRHL1Q8NDY3 354 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 FAM71BQ8TC56 605 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 RSC1A1Q92681 617 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MARK4Q96L34 752 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MYLK2Q9H1R3 596 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 AAMDCQ9H7C9 122 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 SFXN1Q9H9B4 322 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MLXIPQ9HAP2 919 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRA2B-201ENST00000259043 SLC12A4Q9UP95 1085 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 DGKBQ9Y6T7 804 aa5.34□□□□□ -1.55
TRA2B-201ENST00000259043 KTN1Q86UP2 1357 aaKnown RBP5.33□□□□□ -1.56
TRA2B-201ENST00000259043 USP47Q96K76 1375 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 PLEKHG2Q9H7P9 1386 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 SLC38A8A6NNN8 435 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 TNFRSF6BO95407 300 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 ALDOCP09972 364 aaKnown RBP5.33□□□□□ -1.56
TRA2B-201ENST00000259043 HSD3B1P14060 373 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 AKT1P31749 480 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 POLD2P49005 469 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 PTK2BQ14289 1009 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 PRTGQ2VWP7 1150 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 ALFQ53S48 1182 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 ZNF549Q6P9A3 640 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 LRIG3Q6UXM1 1119 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 CLEC4CQ8WTT0 213 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 MAF1Q9H063 256 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 CCDC134Q9H6E4 229 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 CNTN6Q9UQ52 1028 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 LZTS1Q9Y250 596 aa5.33□□□□□ -1.56
TRA2B-201ENST00000259043 NSD3Q9BZ95 1437 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 PALLDQ8WX93 1383 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 A0A0G2JLW4 131 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 FAM90A8PA6NJQ4 464 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 RHODO00212 210 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 SMAD6O43541 496 aaKnown RBP5.32□□□□□ -1.56
TRA2B-201ENST00000259043 CSTBP04080 98 aaKnown RBP5.32□□□□□ -1.56
TRA2B-201ENST00000259043 FAM90A13PP0C7W8 464 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 FAM90A24PP0C7X0 464 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 GRK5P34947 590 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 GALNT1Q10472 559 aaPredicted RBP5.32□□□□□ -1.56
TRA2B-201ENST00000259043 SF3A3Q12874 501 aaKnown RBP eCLIP5.32□□□□□ -1.563e-8■■■■■ 29.7
TRA2B-201ENST00000259043 C6orf10Q5SRN2 563 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 CCDC70Q6NSX1 233 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 GATAD2AQ86YP4 633 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 IP6K1Q92551 441 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 EID2BQ96D98 161 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 PAGR1Q9BTK6 254 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 HTATIP2Q9BUP3 242 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 OSBPL5Q9H0X9 879 aaPredicted RBP5.32□□□□□ -1.56
TRA2B-201ENST00000259043 OBP2BQ9NPH6 170 aa5.32□□□□□ -1.56
TRA2B-201ENST00000259043 COPG1Q9Y678 874 aaKnown RBP5.32□□□□□ -1.56
TRA2B-201ENST00000259043 C4AP0C0L4 1744 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 EVC2Q86UK5 1308 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 CCDC88AQ3V6T2 1871 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 LGALS16A8MUM7 142 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 FOXO6A8MYZ6 492 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 DPEP1P16444 411 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms