RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 INPP4BO15327 924 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 FTH1P02794 183 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ABCB1P08183 1280 aaPredicted RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 NUDT17P0C025 328 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L2P0CJ85 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L3P0CJ86 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L4P0CJ87 422 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L5P0CJ88 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L6P0CJ89 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4L7P0CJ90 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 CCDC166P0CW27 439 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 PLK1P53350 603 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 EVX2Q03828 476 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 SLC34A1Q06495 639 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 KRR1Q13601 381 aaKnown RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 CD248Q9HCU0 757 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DUX4Q9UBX2 424 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 MYOM1P52179 1685 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 hCG_2014768A0A024R1R8 64 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 DCXO43602 365 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 GJB1P08034 283 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 SMAD3P84022 425 aaKnown RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ITGA7Q13683 1181 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 INSCQ1MX18 579 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 LRRN4CLQ8ND94 238 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 MRPL45Q9BRJ2 306 aaKnown RBP19.18■□□□□ 0.66
PTPRE-201ENST00000254667 SYBUQ9NX95 663 aa19.18■□□□□ 0.66
PTPRE-201ENST00000254667 ANXA6P08133 673 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CNPP09543 421 aaKnown RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 AUHQ13825 339 aaKnown RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 SETD9Q8NE22 299 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 DLG3Q92796 817 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CNTNAP1P78357 1384 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 ATP6V1G2O95670 118 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 PFKFB4Q16877 469 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CYP20A1Q6UW02 462 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 FAM228AQ86W67 206 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 SEPHS2Q99611 448 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 ACSS3Q9H6R3 686 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 FBXL21Q9UKT6 434 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 COPG1Q9Y678 874 aaKnown RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CD3EAPO15446 510 aaKnown RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CYP3A5P20815 502 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 SLC41A1Q8IVJ1 513 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 GRIN3AQ8TCU5 1115 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 ZNF398Q8TD17 642 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 MRPL57Q9BQC6 102 aaKnown RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 CCDC167Q9P0B6 97 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 LPOP22079 712 aaPredicted RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 MAPK9P45984 424 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 ATP6V0D1P61421 351 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 FAM46CQ5VWP2 391 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 C12orf29Q8N999 325 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 SELENOMQ8WWX9 145 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 USP7Q93009 1102 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 MYLK2Q9H1R3 596 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 SEMA4BQ9NPR2 832 aaPredicted RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 FBXO6Q9NRD1 293 aaPredicted RBP19.17■□□□□ 0.66
PTPRE-201ENST00000254667 LIMD1Q9UGP4 676 aa19.17■□□□□ 0.66
PTPRE-201ENST00000254667 MAP2K7O14733 419 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 IFNGR2P38484 337 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 RAB10P61026 200 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 CDK18Q07002 472 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ENPEPQ07075 957 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 OASLQ15646 514 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 TXNDC11Q6PKC3 985 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 PIWIL4Q7Z3Z4 852 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ZNF513Q8N8E2 541 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 MAGED4Q96JG8 741 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ZMAT2Q96NC0 199 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 PCDHA2Q9Y5H9 948 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 SMIM28A0A1B0GU29 152 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 EPN2O95208 641 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 LAG3P18627 525 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 GTF2E2P29084 291 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 LRP10Q7Z4F1 713 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 PTGR2Q8N8N7 351 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 PIF1Q9H611 641 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ZC4H2Q9NQZ6 224 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 AGO1Q9UL18 857 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 PSME2Q9UL46 239 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 SLC27A5Q9Y2P5 690 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 BTBD19C9JJ37 291 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 FAM58BPP0C7Q3 252 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 MMP8P22894 467 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 USP39Q53GS9 565 aaKnown RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 C16orf46Q6P387 395 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ADAMTSL2Q86TH1 951 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 KIAA2013Q8IYS2 634 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 SEMA4DQ92854 862 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 APOL4Q9BPW4 351 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 TMEM79Q9BSE2 394 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 UBR1Q8IWV7 1749 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 CLPTM1O96005 669 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 COX7A2P14406 83 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 HTR7P34969 479 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 ARL2P36404 184 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 MARCKSL1P49006 195 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms