RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SYNCRIPO60506 623 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MAGEC1O60732 1142 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 VPS26AO75436 327 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MYL4P12829 197 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NOS2P35228 1153 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GRIA3P42263 894 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ARHGDIAP52565 204 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SQLEQ14534 574 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CYP51A1Q16850 503 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PERM1Q5SV97 790 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ACBD5Q5T8D3 534 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MRNIPQ6NTE8 343 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DRICH1Q6PGQ1 229 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 OR52K2Q8NGK3 314 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NSMCE2Q96MF7 247 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PPP1R2P1Q96PQ5 205 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PLEKHG4BQ96PX9 1271 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 POLR1BQ9H9Y6 1135 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 FBXO5Q9UKT4 447 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 NDUFAF1Q9Y375 327 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ARFGEF1Q9Y6D6 1849 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DOCK5Q9H7D0 1870 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 HCRTO43612 131 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DLGAP3O95886 979 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SERPINB1P30740 379 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 IDH3AP50213 366 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MARC1Q5VT66 337 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DPY19L2P1Q6NXN4 242 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF781Q8N8C0 355 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 OR52B2Q96RD2 323 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SCUBE2Q9NQ36 999 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RIC8BQ9NVN3 520 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 WWOXQ9NZC7 414 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 COMMD3-BMI1R4GMX3 469 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 KCNU1A8MYU2 1149 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CXCL11O14625 94 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MYO1DO94832 1006 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CLK1P49759 484 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 WNT3AP56704 352 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CHRNB3Q05901 458 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF177Q13360 481 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DMC1Q14565 340 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GSTA3Q16772 222 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PGS1Q32NB8 556 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GFM2Q969S9 779 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 LENG1Q96BZ8 264 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GPR20Q99678 358 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 KCTD14Q9BQ13 255 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 MRPL57Q9BQC6 102 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CDH22Q9UJ99 828 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CRLS1Q9UJA2 301 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 A0A087X1B8 175 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PPEF2O14830 753 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DAB1O75553 588 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 INPP1P49441 399 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 RENBPP51606 427 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 BFSP2Q13515 415 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ARMC3Q5W041 872 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PLPPR4Q7Z2D5 763 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DNAJB14Q8TBM8 379 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 FIG4Q92562 907 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 CINPQ9BW66 212 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SPASTQ9UBP0 616 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SEPT3Q9UH03 358 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 GNEQ9Y223 722 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 OAS1P00973 400 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ATP5BP06576 529 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC2A4P14672 509 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 ACTR3P61158 418 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 PLEKHH3Q7Z736 793 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 FBXO39Q8N4B4 442 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SLC7A6OSQ96CW6 309 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 DNAJC1Q96KC8 554 aaKnown RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 HSFY1Q96LI6 401 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SENP6Q9GZR1 1112 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-201ENST00000249837 BRD8Q9H0E9 1235 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 SMPD4Q9NXE4 827 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 XPR1Q9UBH6 696 aa4.67□□□□□ -1.66
VPS13C-201ENST00000249837 C1orf232A0A0U1RR37 186 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 DHRS12A0PJE2 317 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 ZBTB11O95625 1053 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-201ENST00000249837 CHRNGP07510 517 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 DLDP09622 509 aaKnown RBP4.66□□□□□ -1.66
VPS13C-201ENST00000249837 SLC25A11Q02978 314 aaKnown RBP4.66□□□□□ -1.66
VPS13C-201ENST00000249837 PPM1LQ5SGD2 360 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 ZYG11AQ6WRX3 759 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 NT5DC4Q86YG4 428 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 PTGR2Q8N8N7 351 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-201ENST00000249837 DDHD1Q8NEL9 900 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 DENND1AQ8TEH3 1009 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 OSCP1Q8WVF1 389 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 LPPQ93052 612 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 MIPEPQ99797 713 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 C1orf50Q9BV19 199 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 RHOJQ9H4E5 214 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 RIBC2Q9H4K1 309 aa4.66□□□□□ -1.66
VPS13C-201ENST00000249837 DTLQ9NZJ0 730 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms