RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MOCOSQ96EN8 888 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 CAPNS2Q96L46 248 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 CCDC106Q9BWC9 280 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 RHOJQ9H4E5 214 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLN6-201ENST00000249806 MARCH5Q9NX47 278 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 TCAF1Q9Y4C2 921 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 FNDC1Q4ZHG4 1894 aaPredicted RBP21.98■■□□□ 1.11
CLN6-201ENST00000249806 TTC24A2A3L6 582 aaPredicted RBP21.98■■□□□ 1.11
CLN6-201ENST00000249806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.98■■□□□ 1.11
CLN6-201ENST00000249806 WFS1O76024 890 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 VNN2O95498 520 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 CDK7P50613 346 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 ITKQ08881 620 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 TUBB3Q13509 450 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 USP10Q14694 798 aaKnown RBP21.98■■□□□ 1.11
CLN6-201ENST00000249806 ANO4Q32M45 955 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 C10orf120Q5SQS8 335 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 RAP1GAP2Q684P5 730 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 POTEHQ6S545 545 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 TTC8Q8TAM2 541 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 PABPC5Q96DU9 382 aaKnown RBP21.98■■□□□ 1.11
CLN6-201ENST00000249806 NT5MQ9NPB1 228 aa21.98■■□□□ 1.11
CLN6-201ENST00000249806 FAM92AA1XBS5 289 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 PRR5-ARHGAP8B1AHC4 643 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 PEX11AO75192 247 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 RHOQP17081 205 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 SLC11A1P49279 550 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 CSRP3P50461 194 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 WNT3AP56704 352 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 ARHGAP8P85298 464 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 KDSRQ06136 332 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 VWA5B1Q5TIE3 1220 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 FBXL22Q6P050 247 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 CIR1Q86X95 450 aaPredicted RBP21.97■■□□□ 1.11
CLN6-201ENST00000249806 ZNF354CQ86Y25 554 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 LRRC49Q8IUZ0 686 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 PXYLP1Q8TE99 480 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 EBF2Q9HAK2 575 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 HMX1Q9NP08 348 aaPredicted RBP21.97■■□□□ 1.11
CLN6-201ENST00000249806 ACSS2Q9NR19 701 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 MARCH2Q9P0N8 246 aa21.97■■□□□ 1.11
CLN6-201ENST00000249806 MTMR11A4FU01 709 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 B2RBV5 119 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 SERPINA6P08185 405 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 FGFR3P22607 806 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 HARS2P49590 506 aaKnown RBP21.96■■□□□ 1.11
CLN6-201ENST00000249806 HNRNPDQ14103 355 aaKnown RBP21.96■■□□□ 1.11
CLN6-201ENST00000249806 SEPT6Q14141 434 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 IHHQ14623 411 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TCTN1Q2MV58 587 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 RTP2Q5QGT7 225 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TMEM173Q86WV6 379 aaPredicted RBP21.96■■□□□ 1.11
CLN6-201ENST00000249806 SLC41A1Q8IVJ1 513 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 MFSD6LQ8IWD5 586 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 PSMG2Q969U7 264 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TMEM248Q9NWD8 314 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 NSMCE4AQ9NXX6 385 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 MIA3Q5JRA6 1907 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 OR6C75A6NL08 312 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 GLRBP48167 497 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 NDST2P52849 883 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 DUSP4Q13115 394 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 ZNF460Q14592 562 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TAS1R1Q7RTX1 841 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TEX9Q8N6V9 391 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 ATP6V0D2Q8N8Y2 350 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 BTN2A3PQ96KV6 586 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 C1QTNF1Q9BXJ1 281 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 SLC25A51Q9H1U9 297 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TASP1Q9H6P5 420 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TLR8Q9NR97 1041 aaKnown RBP21.96■■□□□ 1.11
CLN6-201ENST00000249806 CREBZFQ9NS37 354 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.96■■□□□ 1.11
CLN6-201ENST00000249806 CLIC5Q9NZA1 410 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 TLK1Q9UKI8 766 aa21.96■■□□□ 1.11
CLN6-201ENST00000249806 SLC12A8A0AV02 714 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 TK2O00142 265 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 RENBPP51606 427 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 USP4Q13107 963 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 KDELC1Q6UW63 502 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 CNTN4Q8IWV2 1026 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 TMEM151AQ8N4L1 468 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 MYEOVQ96EZ4 313 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.95■■□□□ 1.14e-8■■■■□ 25.2
CLN6-201ENST00000249806 TREX1Q9NSU2 369 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 GREB1Q4ZG55 1949 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 IGLV3-10A0A075B6K4 115 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 ZNF195O14628 629 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 SLC35E2BP0CK96 405 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 COL6A1P12109 1028 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 CD86P42081 329 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 SLC1A2P43004 574 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 IDH3AP50213 366 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 TRIP4Q15650 581 aaPredicted RBP21.95■■□□□ 1.1
CLN6-201ENST00000249806 WASHC2DQ5SRD0 308 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 MARC1Q5VT66 337 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 FUT10Q6P4F1 479 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 CEP97Q8IW35 865 aa21.95■■□□□ 1.1
CLN6-201ENST00000249806 GIPC2Q8TF65 315 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms