RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 KDELC2Q7Z4H8 507 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 UROC1Q96N76 676 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 ATXN3LQ9H3M9 355 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 RBM22Q9NW64 420 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 LOC100653049A0A140TA62 436 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 KCNU1A8MYU2 1149 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 SEPT4O43236 478 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 KRT34O76011 436 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 MPSTP25325 297 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 C6orf163Q5TEZ5 329 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 AFMIDQ63HM1 303 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 ZNF598Q86UK7 904 aaKnown RBP19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 CEP97Q8IW35 865 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 OR52B2Q96RD2 323 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 RUVBL2Q9Y230 463 aaKnown RBP19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 TCAF1Q9Y4C2 921 aa19.81■□□□□ 0.76
CDC42EP1-201ENST00000249014 H2AFYO75367 372 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SMNDC1O75940 238 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SORBS2O94875 1100 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 APOA4P06727 396 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 TYMPP19971 482 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 HTR7P34969 479 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 CHRNA4P43681 627 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 GRIA4P48058 902 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 PAPOLAP51003 745 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SLC39A12Q504Y0 691 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SDHAF4Q5VUM1 108 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 LIPMQ5VYY2 423 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 FRMD7Q6ZUT3 714 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SCN4BQ8IWT1 228 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 FSTL5Q8N475 847 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 RTL3Q8N8U3 475 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SREK1Q8WXA9 508 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 MRGPRX2Q96LB1 330 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 TRMT13Q9NUP7 481 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 MIA3Q5JRA6 1907 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 TARM1B6A8C7 271 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 LIN7AO14910 233 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 ZMPSTE24O75844 475 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 RPLP2P05387 115 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 PDHA1P08559 390 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 ANPEPP15144 967 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 CD1EP15812 388 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 GEMP55040 296 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 NKX3-2P78367 333 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SLC12A1Q13621 1099 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 CNGA3Q16281 694 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 RGMBQ6NW40 437 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 ZNF280BQ86YH2 543 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 KBTBD2Q8IY47 623 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 PPHLN1Q8NEY8 458 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 RDH11Q8TC12 318 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 FAM136AQ96C01 138 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 CMTM5Q96DZ9 223 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 DRC3Q9H069 523 aa19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 ILKAPQ9H0C8 392 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 NOL6Q9H6R4 1146 aaKnown RBP19.8■□□□□ 0.76
CDC42EP1-201ENST00000249014 SLC1A2P43004 574 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 PIK3R6Q5UE93 754 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 POTEHQ6S545 545 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 RANBP10Q6VN20 620 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 SAPCD2Q86UD0 394 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 SPATA6LQ8N4H0 392 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 STYXQ8WUJ0 223 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 SCYL1Q96KG9 808 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 FSD1LQ9BXM9 530 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 OSBPL1AQ9BXW6 950 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 TRPV6Q9H1D0 765 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 ENTPD7Q9NQZ7 604 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 TREX1Q9NSU2 369 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 ABI2Q9NYB9 513 aaPredicted RBP19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 MID2Q9UJV3 735 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 DOCK4Q8N1I0 1966 aa19.79■□□□□ 0.76
CDC42EP1-201ENST00000249014 GOLGA8QA0A0J9YX86 632 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 FAM95CA0A1B0GW59 222 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GOLGA8OA6NCC3 632 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GOLGA8NF8WBI6 632 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 MATN2O00339 956 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 CABYRO75952 493 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 DDHD2O94830 711 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 ITGAXP20702 1163 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GLDCP23378 1020 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GPR15P49685 360 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 FLT3LGP49771 235 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 NAGLUP54802 743 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 CACNB2Q08289 660 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 DLG1Q12959 904 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 ARL13AQ5H913 290 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 NOMO2Q5JPE7 1267 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 LRRC8EQ6NSJ5 796 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 TIGD7Q6NT04 549 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 CCDC117Q8IWD4 279 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 PPP1R36Q96LQ0 422 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GPR78Q96P69 363 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 UNKQ9C0B0 810 aaKnown RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 WDR55Q9H6Y2 383 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 CYP4F11Q9HBI6 524 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 TCF7L2Q9NQB0 619 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 ANGPTL2Q9UKU9 493 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 PPM1HQ9ULR3 514 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms