RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 RGS2P41220 211 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ALLCQ8N6M5 410 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 DTX3Q8N9I9 347 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 HAS1Q92839 578 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 VAT1Q99536 393 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 MLPHQ9BV36 600 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 GMPPBQ9Y5P6 360 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 KRT87PA6NCN2 255 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TMEM191CA6NGB0 347 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SLC2A3P11169 496 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TYMPP19971 482 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 FAM45BPQ6NSW5 357 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CD302Q8IX05 232 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 VANGL1Q8TAA9 524 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 TRIM63Q969Q1 353 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 FEM1AQ9BSK4 669 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SNRNP25Q9BV90 132 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 HOXA7P31268 230 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 PPM1LQ5SGD2 360 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 HERC6Q8IVU3 1022 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 KLHL31Q9H511 634 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 HMG20AQ9NP66 347 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 HACL1Q9UJ83 578 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZMYND8Q9ULU4 1186 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 H3BSH0 61 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 FBXO21O94952 628 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CYP1A2P05177 515 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 COPZ1P61923 177 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PPP1R8Q12972 351 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 LAPTM5Q13571 262 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CCDC153Q494R4 210 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SPANXN3Q5MJ09 141 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 RD3Q7Z3Z2 195 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 OR10Q1Q8NGQ4 319 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 DNAJB3Q8WWF6 145 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 COPS5Q92905 334 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZNF512BQ96KM6 892 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 VPS28Q9UK41 221 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TRIM38O00635 465 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 VARSP26640 1264 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PPM1MQ96MI6 270 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CRISPLD1Q9H336 500 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 A0A1B0GVG6 124 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NPEPPSL1A6NEC2 478 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 OR6B1O95007 311 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZNF483Q8TF39 744 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 PCDHA11Q9Y5I1 949 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NOTCH3Q9UM47 2321 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 SLC35F4A4IF30 521 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CCNKO75909 580 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TRUB2O95900 331 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 PTNP21246 168 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZNF177Q13360 481 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 COLEC12Q5KU26 742 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 INTS5Q6P9B9 1019 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 ELOA2Q8IYF1 753 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 NUAK2Q9H093 628 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 EHD1Q9H4M9 534 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 DNAJA2O60884 412 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 UQCRBP14927 111 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 MAPK9P45984 424 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 RPL5P46777 297 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 HARS2P49590 506 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 CDH18Q13634 790 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CRTC3Q6UUV7 619 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ERO1BQ86YB8 467 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 COMMD3-BMI1R4GMX3 469 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TCRBV9S1A1TA0A576 114 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 TOP3BO95985 862 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 CD86P42081 329 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ANKS1BQ7Z6G8 1248 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 LINC00523Q86TU6 105 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SP8Q8IXZ3 490 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PTGR2Q8N8N7 351 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 LSM14AQ8ND56 463 aaKnown RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 PCDHAC1Q9H158 963 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CDH22Q9UJ99 828 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SEMG2Q02383 582 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 GNA12Q03113 381 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NEK5Q6P3R8 708 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 CASP12Q6UXS9 341 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NAPRTQ6XQN6 538 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 LRRC55Q6ZSA7 311 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 ZHX1-C8orf76Q96EF9 292 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 C9orf16Q9BUW7 83 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PREBQ9HCU5 417 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PTPRMP28827 1452 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 IQCF5A8MTL0 148 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NDUFB5O43674 189 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NOL4O94818 638 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 GSTM5P46439 218 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 SPIBQ01892 262 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 NBPF12Q5TAG4 269 aaPredicted RBP7.6□□□□□ -1.19
RIF1-201ENST00000243326 IRF2BP1Q8IU81 584 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 BDH2Q9BUT1 245 aa7.6□□□□□ -1.19
RIF1-201ENST00000243326 PLA2G12BQ9BX93 195 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms