RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TOP6BLQ8N6T0 577 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 DNAJC16Q9Y2G8 782 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 HEATR9A2RTY3 570 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TMEM191CA6NGB0 347 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PRR5-ARHGAP8B1AHC4 643 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TIMM44O43615 452 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 THRAP10827 490 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 OR1E1P30953 314 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 ELK3P41970 407 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 ARHGAP8P85298 464 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TTLL9Q3SXZ7 439 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SIX5Q8N196 739 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 C12orf29Q8N999 325 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 FZD8Q9H461 694 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 ABCC13Q9NSE7 274 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.638e-11■■■■■ 49.7
COPA-201ENST00000241704 TRHDEQ9UKU6 1024 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 RBMX2Q9Y388 322 aaKnown RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TSPAN1O60635 241 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 DDHD2O94830 711 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ZBTB11O95625 1053 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 CSH1P0DML2 217 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 CSH2P0DML3 217 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 YBX3P16989 372 aaKnown RBP eCLIP11.12□□□□□ -0.633e-8■■□□□ 11.6
COPA-201ENST00000241704 CNTFP26441 200 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SSTR1P30872 391 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 MRPS22P82650 360 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 CAPRIN1Q14444 709 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 DSG4Q86SJ6 1040 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 C1orf127Q8N9H9 656 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SKA1Q96BD8 255 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 EPB41L1Q9H4G0 881 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 MAGEB16A2A368 324 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 H3BSA7 217 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ALDH1A2O94788 518 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 CDK4P11802 303 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 DDX5P17844 614 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 LAG3P18627 525 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SLC5A3P53794 718 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 PLOD1Q02809 727 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 BBS12Q6ZW61 710 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 C10orf71Q711Q0 1435 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SUSD6Q92537 303 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 NCLNQ969V3 563 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 CELF6Q96J87 481 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 APOL2Q9BQE5 337 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 PADI3Q9ULW8 664 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SLC45A1Q9Y2W3 748 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 PTCH2Q9Y6C5 1203 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 LIASO43766 372 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 GLRA3O75311 464 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 CILPO75339 1184 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 BAIAP3O94812 1187 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 C22orf31O95567 290 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 GLUD1P00367 558 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 RBL1P28749 1068 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SP2Q02086 613 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ZNF618Q5T7W0 954 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 KYAT3Q6YP21 454 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 TKTL2Q9H0I9 626 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 KPNA3O00505 521 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 APOA4P06727 396 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TUBA4AP68366 448 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TRAF2Q12933 501 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 SGCGQ13326 291 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TUSC3Q13454 348 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 UBAP2LQ14157 1087 aaKnown RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 HECTD3Q5T447 861 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 MARC1Q5VT66 337 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 PLPP4Q5VZY2 271 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 MRNIPQ6NTE8 343 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 DCLRE1AQ6PJP8 1040 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 LCLAT1Q6UWP7 414 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 TPGS1Q6ZTW0 290 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ADGRG6Q86SQ4 1221 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
COPA-201ENST00000241704 ZNF557Q8N988 423 aaPredicted RBP11.12□□□□□ -0.63
COPA-201ENST00000241704 RNF157Q96PX1 679 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms