RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RCN3Q96D15 328 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ASB7Q9H672 318 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 SP140LQ9H930 580 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NPHP4O75161 1426 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 WWP2O00308 870 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 RGS10O43665 173 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ORC5O43913 435 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 OXCT1P55809 520 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 QPCTQ16769 361 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 OR52L1Q8NGH7 329 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MCOLN3Q8TDD5 553 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MKLN1Q9UL63 735 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CEMIPQ8WUJ3 1361 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MAP2P11137 1827 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 SIN3BO75182 1162 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CCR1P32246 355 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MARC1Q5VT66 337 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 PIGWQ7Z7B1 504 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 AMIGO2Q86SJ2 522 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CCDC185Q8N715 623 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 SPATA5L1Q9BVQ7 753 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CCNT2O60583 730 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 TCEA3O75764 348 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 GPIP06744 558 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CLCN2P51788 898 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 FITM2Q8N6M3 262 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 GSTCDQ8NEC7 633 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 NOL11Q9H8H0 719 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 MFHAS1Q9Y4C4 1052 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 TCRBV9S1A1TA0A576 114 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 MPZL2O60487 215 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 HALP42357 657 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 AP3S2P59780 193 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 TDRD10Q5VZ19 366 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 TMEM139Q8IV31 216 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 RBM15BQ8NDT2 890 aaKnown RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 CERS2Q96G23 380 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 RPRD1AQ96P16 312 aaPredicted RBP8.31□□□□□ -1.08
APOB-201ENST00000233242 RHOBTB2Q9BYZ6 727 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 ST3GAL5Q9UNP4 418 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
APOB-201ENST00000233242 CST1P01037 141 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 MYL9P24844 172 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ACSM2AQ08AH3 577 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ACSM2BQ68CK6 577 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 MARSP56192 900 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 TXNDC11Q6PKC3 985 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SVOPLQ8N434 492 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PDCD10Q9BUL8 212 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 TDRD1Q9BXT4 1180 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 POLIQ9UNA4 740 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SAMHD1Q9Y3Z3 626 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 SEMA3DO95025 777 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC25A27O95847 323 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 NR2F6P10588 404 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ZNF143P52747 638 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 IL2P60568 153 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ZNF621Q6ZSS3 439 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 RASSF6Q6ZTQ3 369 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 PRMT5O14744 637 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 ZNF37AP17032 561 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 ZNF572Q7Z3I7 529 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 SPATA20Q8TB22 786 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 NRP2O60462 931 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 EGFRP00533 1210 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 DARSP14868 501 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 HKDC1Q2TB90 917 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 CLPTM1LQ96KA5 538 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 PANX3Q96QZ0 392 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SNX6Q9UNH7 406 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 GNEQ9Y223 722 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 MYO3AQ8NEV4 1616 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PDLIM1O00151 329 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 DYRK3O43781 588 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 TIE1P35590 1138 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 MTMR2Q13614 643 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 EFCAB12Q6NXP0 572 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 FAR1Q8WVX9 515 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ZNF670Q9BS34 389 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 HGH1Q9BTY7 390 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 RACGAP1Q9H0H5 632 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 RBM22Q9NW64 420 aaKnown RBP eCLIP8.3□□□□□ -1.082e-24■■■■□ 25.6
APOB-201ENST00000233242 M0QX08 132 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 AVILO75366 819 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ATP6V0D1P61421 351 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ADAM17P78536 824 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 MAPKAPK3Q16644 382 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 FAM131BQ86XD5 332 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PHF10Q8WUB8 498 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 ANGPT4Q9Y264 503 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 VIRMAQ69YN4 1812 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 H6PDO95479 791 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 CDH4P55283 916 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 RTP1P59025 263 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 P2RY8Q86VZ1 359 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PHF13Q86YI8 300 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms