RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 DNMT3LQ9UJW3 386 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 SORCS3Q9UPU3 1222 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 BANF1O75531 89 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CATP04040 527 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 ATP5F1P24539 256 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 SERPINB1P30740 379 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 SGCGQ13326 291 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ZFP1Q6P2D0 407 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TRPC4APQ8TEL6 797 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TSEN34Q9BSV6 310 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 TMEM109Q9BVC6 243 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TM6SF2Q9BZW4 377 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 SENP6Q9GZR1 1112 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 FBXO6Q9NRD1 293 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 THG1LQ9NWX6 298 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 FBXO5Q9UKT4 447 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CLOCKO15516 846 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CNOT3O75175 753 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 VPS4BO75351 444 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TYMPP19971 482 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 HSPA14Q0VDF9 509 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ACOX1Q15067 660 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CRY1Q16526 586 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 MFSD4BQ5TF39 518 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 MTSS1LQ765P7 747 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 DSG4Q86SJ6 1040 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 OR6Y1Q8NGX8 325 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 GPR20Q99678 358 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ACE2Q9BYF1 805 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 LHX5Q9H2C1 402 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 SEMA4BQ9NPR2 832 aaPredicted RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 A0A1B0GUL6 1792 aa11.65□□□□□ -0.55
NOD1-201ENST00000222823 ZNF862O60290 1169 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ABCB1P08183 1280 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 FAM58BPP0C7Q3 252 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CYP2A6P11509 494 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 LBPP18428 481 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PTPN3P26045 913 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 S100A3P33764 101 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PKNOX1P55347 436 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 IL5RAQ01344 420 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 IL27RAQ6UWB1 636 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ZNF557Q8N988 423 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 C12orf50Q8NA57 414 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 CLEC4DQ8WXI8 215 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 DPF3Q92784 378 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TLCD1Q96CP7 247 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 DUSP16Q9BY84 665 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 RERGLQ9H628 205 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ASB8Q9H765 288 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 SLCO1B3Q9NPD5 702 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 KLHL28Q9NXS3 571 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ARHGAP28Q9P2N2 729 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 GIT1Q9Y2X7 761 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 COQ4Q9Y3A0 265 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 H3BMM5 538 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CSH1P0DML2 217 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CSH2P0DML3 217 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 HPGDP15428 266 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TFEBP19484 476 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 DGKAP23743 735 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TKTP29401 623 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 CLCN5P51795 746 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CACNA2D1P54289 1103 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 PIWIL4Q7Z3Z4 852 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CACUL1Q86Y37 369 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 GDPD5Q8WTR4 605 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 MRPL17Q9NRX2 175 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 PCDHA11Q9Y5I1 949 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 UNC5CO95185 931 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PARNO95453 639 aaKnown RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 CST3P01034 146 aaPredicted RBP11.64□□□□□ -0.55
NOD1-201ENST00000222823 ACADMP11310 421 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CHRNB2P17787 502 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PTGIRP43119 386 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 CENPAP49450 140 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 GPR15P49685 360 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 SP3Q02447 781 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 IRF8Q02556 426 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 ENPEPQ07075 957 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 STXBP5Q5T5C0 1151 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 TTC27Q6P3X3 843 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
NOD1-201ENST00000222823 USP45Q70EL2 814 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms