RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 Q9Y3F1 56 aa12.24□□□□□ -0.45
CHPF2-201ENST00000035307 RP1L1Q8IWN7 2480 aaPredicted RBP12.24□□□□□ -0.45
CHPF2-201ENST00000035307 H7C4K7 107 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CHADO15335 359 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 PEX1O43933 1283 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 MTA2O94776 668 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CSH1P0DML2 217 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CSH2P0DML3 217 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 KCNQ1P51787 676 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 EPHB3P54753 998 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CDH13P55290 713 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 DDX39BQ13838 428 aaKnown RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF460Q14592 562 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CLLU1OSQ5K130 101 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 ATP6V0D2Q8N8Y2 350 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CASP10Q92851 521 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 FRMD8P1Q9BZ68 369 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 NMRAL1Q9HBL8 299 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 FGFR3P22607 806 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 IGFBP4P22692 258 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CYP4F8P98187 520 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CYP1B1Q16678 543 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 OLFML1Q6UWY5 402 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TMEM173Q86WV6 379 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 IGDCC3Q8IVU1 814 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 DCBLD1Q8N8Z6 715 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 MOCOSQ96EN8 888 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CCDC138Q96M89 665 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 THAP1Q9NVV9 213 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CHKBQ9Y259 395 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 SLC30A1Q9Y6M5 507 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TIMM44O43615 452 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TRIM13O60858 407 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 PGAM1P18669 254 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 SLC11A2P49281 568 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 CDH17Q12864 832 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 UPP1Q16831 310 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 RTP2Q5QGT7 225 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 DNAJC14Q6Y2X3 702 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 YTHDF3Q7Z739 585 aaKnown RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 MIER2Q8N344 545 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
CHPF2-201ENST00000035307 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 TMEM161AQ9NX61 479 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 DERAQ9Y315 318 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 SNX13Q9Y5W8 968 aa12.23□□□□□ -0.45
CHPF2-201ENST00000035307 RAMP2O60895 175 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SERPINE1P05121 402 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 CD86P42081 329 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 HADHBP55084 474 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 DEFB103AP81534 67 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 RNF19BQ6ZMZ0 732 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SLC26A9Q7LBE3 791 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 FAM13CQ8NE31 585 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 CD101Q93033 1021 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 FBXO44Q9H4M3 255 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 CNGB3Q9NQW8 809 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 ABCC13Q9NSE7 274 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 NR5A2O00482 541 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 STX7O15400 261 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 FAM189A1O60320 539 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SMNDC1O75940 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 KCNE1P15382 129 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 ATP5C1P36542 298 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 MRPS22P82650 360 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SPDYCQ5MJ68 293 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 RARS2Q5T160 578 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 TXNDC8Q6A555 127 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 PIWIL2Q8TC59 973 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 MCRS1Q96EZ8 462 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 CDRT15Q96T59 188 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 AGAP2Q99490 1192 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 NAT9Q9BTE0 207 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 ARHGEF4Q9NR80 690 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 WARS2Q9UGM6 360 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 APPL1Q9UKG1 709 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 MTSS1O43312 755 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 NBNO60934 754 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 KATNA1O75449 491 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SRP72O76094 671 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 BAIAP3O94812 1187 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 GUCA1CO95843 209 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 RHOCP08134 193 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms