RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF26P17031 533 aaPredicted RBP14.23□□□□□ -0.13
USH1C-201ENST00000005226 ADRA1BP35368 520 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CDH15P55291 814 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 MAP3K7CLP57077 242 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 TPI1P60174 286 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 RPL26P61254 145 aaKnown RBP14.23□□□□□ -0.13
USH1C-201ENST00000005226 MARCH8Q5T0T0 291 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CATSPER4Q7RTX7 472 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 ZNF410Q86VK4 478 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
USH1C-201ENST00000005226 AHI1Q8N157 1196 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
USH1C-201ENST00000005226 CAAP1Q9H8G2 361 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 SLC2A6Q9UGQ3 507 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 SHROOM3Q8TF72 1996 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 YJEFN3A6XGL0 299 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 CABYRO75952 493 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ZBTB7AO95365 584 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 MT-CYBP00156 380 aaPredicted RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 TSPAN8P19075 237 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ADCYAP1R1P41586 468 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 PLK1P53350 603 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 PSME3P61289 254 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 NOL9Q5SY16 702 aaKnown RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 LRRC8EQ6NSJ5 796 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 FAM43BQ6ZT52 329 aaPredicted RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 EDEM1Q92611 657 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 OSMRQ99650 979 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 SLC39A3Q9BRY0 314 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 MCMBPQ9BTE3 642 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 TRPV6Q9H1D0 765 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ATXN3LQ9H3M9 355 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ZNF696Q9H7X3 374 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 LRRC4Q9HBW1 653 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 CCDC167Q9P0B6 97 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 SNX13Q9Y5W8 968 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 PAPPA2Q9BXP8 1791 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 CENPFP49454 3210 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 AURKAO14965 403 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 NOS2P35228 1153 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ACADSBP45954 432 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 GALK1P51570 392 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 TKTL1P51854 596 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 ZFP1Q6P2D0 407 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 HMGCLL1Q8TB92 370 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 WNT8BQ93098 351 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 TSNARE1Q96NA8 513 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 GPR22Q99680 433 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 CIB1Q99828 191 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 RCOR3Q9P2K3 495 aaPredicted RBP14.22□□□□□ -0.13
USH1C-201ENST00000005226 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 PCDHGA7Q9Y5G6 932 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 CEPT1Q9Y6K0 416 aa14.22□□□□□ -0.13
USH1C-201ENST00000005226 DNAJC25-GNG10A0A024R161 153 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 H3BRB1 525 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 SDHDO14521 159 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 MAGEB3O15480 346 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 CKMT2P17540 419 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 HPCAP84074 193 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 APOFQ13790 326 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 ESRP1Q6NXG1 681 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 TXNDC5Q8NBS9 432 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 APPL2Q8NEU8 664 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 ULBP1Q9BZM6 244 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 TUT1Q9H6E5 874 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 TRPC7Q9HCX4 862 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 TMCO1Q9UM00 188 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 SMIM28A0A1B0GU29 152 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 TARM1B6A8C7 271 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 DAB1O75553 588 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 TMCC1O94876 653 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 PSMC3P17980 439 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 KCNA5P22460 613 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 RPL34P49207 117 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 LAMC2Q13753 1193 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 MYBPC3Q14896 1274 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 MTX3Q5HYI7 312 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 GPRIN1Q7Z2K8 1008 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 LCA5Q86VQ0 697 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 SIX6OS1Q8N1H7 587 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 CNTD1Q8N815 330 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 B3GALNT2Q8NCR0 500 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 OR9I1Q8NGQ6 314 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 LPGAT1Q92604 370 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 ABTB1Q969K4 478 aaPredicted RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 ZFRQ96KR1 1074 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 GPR78Q96P69 363 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 MPHOSPH6Q99547 160 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 CCT7Q99832 543 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 C16orf70Q9BSU1 422 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms