RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 NXF3Q9H4D5 531 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 GPATCH2Q9NW75 528 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SCHIP1Q9P0W5 487 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 SAE1Q9UBE0 346 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 MKL2Q9ULH7 1088 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 F8W810 466 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CILPO75339 1184 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 C4BPAP04003 597 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 FGFR1P11362 822 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MGAT1P26572 445 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 HPCAL1P37235 193 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 HSPA13P48723 471 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TTPAP49638 278 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ELP6Q0PNE2 266 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 POU4F3Q15319 338 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RASIP1Q5U651 963 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PPP2R2DQ66LE6 453 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 KCNT2Q6UVM3 1135 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SERPINA13PQ6UXR4 307 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ZCCHC9Q8N567 271 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 EIF1ADQ8N9N8 165 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 TDRD5Q8NAT2 981 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 PHC3Q8NDX5 983 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CEP70Q8NHQ1 597 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SMG7Q92540 1137 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 MBOAT7Q96N66 472 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 BBS2Q9BXC9 721 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 REXO4Q9GZR2 422 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 ETNK1Q9HBU6 452 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MPP6Q9NZW5 540 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CFAP97Q9P2B7 532 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PCDHGC3Q9UN70 934 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 DOT1LQ8TEK3 1739 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 LAMB4A4D0S4 1761 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 IGLV3-22A0A075B6J6 115 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 A0A1W2PQH9 124 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 URADA6NGE7 173 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ARL5CA6NH57 179 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 A6NHS1 94 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CACNB4O00305 520 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 HMGB3O15347 200 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 CCL16O15467 120 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 C22orf31O95567 290 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ITGAVP06756 1048 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CPA3P15088 417 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TACR1P25103 407 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RRM2P31350 389 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 OR1D2P34982 312 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GPR1P46091 355 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 POLD2P49005 469 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PEX5P50542 639 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CLCN5P51795 746 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CASP5P51878 434 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CDH4P55283 916 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GAD2Q05329 585 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SLC20A2Q08357 652 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SPEM2Q0P670 501 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 FAM187BQ17R55 369 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ZNF792Q3KQV3 632 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 HSDL1Q3SXM5 330 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 C2CD6Q53TS8 623 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MIIPQ5JXC2 388 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 EEF1DP3Q658K8 133 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SEL1L3Q68CR1 1132 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CYP20A1Q6UW02 462 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 UBE2R2Q712K3 238 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 FBXO39Q8N4B4 442 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PLEKHA8Q96JA3 519 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RMDN2Q96LZ7 410 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TCF25Q9BQ70 676 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 BRD9Q9H8M2 597 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 KCND1Q9NSA2 647 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SOX13Q9UN79 622 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 NR2E1Q9Y466 385 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PTPRJQ12913 1337 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 NCF1BA6NI72 391 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 PDZK1P1A8MUH7 402 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 NCF1CA8MVU1 366 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 DNM1LO00429 736 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RGS14O43566 566 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CCNT2O60583 730 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 FKBP9O95302 570 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SLC10A3P09131 477 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 NCF1P14598 390 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 TNFRSF8P28908 595 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GPC1P35052 558 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MAPKAPK2P49137 400 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MEOX1P50221 254 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GJA9P57773 515 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 NOMO3P69849 1222 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SMAD3P84022 425 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 BTKQ06187 659 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 DNAJC3Q13217 504 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GNA13Q14344 377 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CSHL1Q14406 222 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ECM1Q16610 540 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ATP6AP1LQ52LC2 224 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 HLA-DQA1Q5Y7H0 255 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms