RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ranbp9P69566 653 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Adcyap1r1P70205 496 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 CkbQ04447 381 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Znf800Q0VEE6 662 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 1810049J17RikQ3V2G9 153 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gm5414Q6IFZ8 552 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cgrrf1Q8BMJ7 332 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arfip2Q8K221 341 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Clp1Q99LI9 425 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 GmprQ9DCZ1 345 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 ClcnkbQ9WUB6 687 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tmem115Q9WUH1 350 aa16.13■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kpna7C0LLJ0 499 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Zbtb11G5E8B9 1050 aaKnown RBP16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tnk2O54967 1055 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Usp2O88623 613 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 P01631 113 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dnmt3cP0DOY1 709 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 UmpsP13439 481 aaKnown RBP16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Irf7P70434 457 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 FerP70451 823 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 PrlrQ08501 608 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Nfe2l2Q60795 597 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arl13bQ640N2 427 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 WlsQ6DID7 541 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Maml1Q6T264 1020 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc18a2Q8BRU6 517 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ldlrap1Q8C142 308 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arhgap18Q8K0Q5 663 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tmem161aQ8VCA6 480 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Stard13Q923Q2 1113 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 PgcQ9D7R7 392 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc39a5Q9D856 535 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 CenpkQ9ESN5 271 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Sh2d4bA6X942 431 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kcnt2D3Z649 1135 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Zfp758E9QAA1 583 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 P01648 108 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 S100bP50114 92 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 CidecP56198 239 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Psmb4P99026 264 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Afap1l2Q5DTU0 825 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Foxd4Q60688 444 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ino80dQ66JY2 873 aaKnown RBP16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 TCAIMQ66JZ4 499 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vtcn1Q7TSP5 283 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc9a7Q8BLV3 726 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Trerf1Q8BXJ2 1205 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Neu4Q8BZL1 478 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Rprd1aQ8VDS4 312 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dnajc9Q91WN1 259 aaKnown RBP16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cwh43Q91YL7 699 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Spred2Q924S7 410 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 LiasQ99M04 373 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arl8bQ9CQW2 186 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Lgals2Q9CQW5 130 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 DtnaQ9D2N4 746 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Capn7Q9R1S8 813 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 TfebQ9R210 475 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Mzf1S4R1L6 814 aa16.12■□□□□ 0.17
Trim39-203ENSMUST00000113706 Shroom3Q9QXN0 1986 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 2310061I04RikB8JJ69 315 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 PiggD3Z3Y1 983 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ring1O35730 406 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ndst2P52850 883 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Smpdl3aP70158 445 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc22a16Q497L8 649 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Prss36Q5K2P8 849 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Pabpn1lQ5XFR0 273 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Igfbp7Q61581 281 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Exoc3l4Q6DIA2 721 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Mterf2Q8BKY8 385 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ftsj1Q8CBC7 324 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gtse1Q8R080 741 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Rps6kl1Q8R2S1 544 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Setd7Q8VHL1 366 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Trpc4Q9QUQ5 974 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Adamts5Q9R001 930 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Serpinb3cA2RSF9 386 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Znf683I7HJS4 458 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 SnnP61807 88 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 PrkcgP63318 697 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Sort1Q6PHU5 825 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Zbtb41Q811F1 908 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ppp1r12bQ8BG95 976 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Pdcd2lQ8C5N5 364 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Lrif1Q8CDD9 755 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Pdzd7E9Q9W7 1021 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vmn2r70K7N702 854 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Fpr-rs3O88537 343 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Scaf4Q6PFF0 1209 aaKnown RBP16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Acvr1cQ8K348 493 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dhrs1Q99L04 313 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ropn1Q9ESG2 212 aa16.11■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dnah12Q3V0Q1 3086 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vsig10l2A0A140LHF2 776 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc2a4P14142 509 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 CblP22682 913 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gata5P97489 404 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kpna1Q60960 538 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 85.6 ms