RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Wdr59Q8C0M0 992 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Rec8Q8C5S7 591 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Appl1Q8K3H0 707 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 E2f4Q8R0K9 410 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Tbc1d19Q8VDV7 526 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Ttc39cQ8VE09 580 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Olfr697Q8VFM4 317 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Barhl2Q8VIB5 384 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Gtpbp3Q923K4 492 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Alg14Q9D081 217 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 PirQ9D711 290 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Sgpp1Q9JI99 430 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 P2ry4Q9JJS7 361 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Pex3Q9QXY9 372 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Slc26a4Q9R155 780 aa8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Ascc3E9PZJ8 2198 aaKnown RBP8.09□□□□□ -1.11
Scn8a-202ENSMUST00000096198 Pkd2l1A2A259 760 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Atp8b5A3FIN4 1183 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Phf11A6H5X4 337 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Dthd1E9PZX1 795 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Speer2E9Q9U2 264 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gm10801F7C7Q0 168 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gm19345G3UYD9 124 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 FkbplO35450 347 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Adh1P00329 375 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Msh3P13705 1091 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Lhx3P50481 400 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 St3gal1P54751 337 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Slc12a1P55014 1095 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 LxnP70202 222 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Teddm2Q208S0 260 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Itgb2lQ3UV74 738 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Slc9b2Q5BKR2 547 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Cacna2d4Q5RJF7 1116 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Smarcd1Q61466 515 aaKnown RBP8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Sf1Q64213 653 aaKnown RBP8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gstt1Q64471 240 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Cxxc4Q6NXI8 198 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Msantd2Q6NZR2 559 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Cep135Q6P5D4 1140 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Arhgap10Q6Y5D8 786 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gpr6Q6YNI2 363 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 DgkzQ80UP3 929 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Rufy1Q8BIJ7 712 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 B4gat1Q8BWP8 415 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Tmx3Q8BXZ1 456 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Zfp202Q8C879 641 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gramd4Q8CB44 633 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Crispld1Q8CGD2 500 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Kiaa0391Q8JZY4 584 aaKnown RBP8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Pdlim2Q8R1G6 349 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 McmbpQ8R3C0 642 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Pcdhb2Q91Y00 799 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Npffr2Q924H0 417 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Fam69bQ99ML4 431 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Zcchc8Q9CYA6 709 aaKnown RBP8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Cldn22Q9D7U6 220 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Krt7Q9DCV7 457 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Arhgef7Q9ES28 862 aa8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Dnajb12Q9QYI4 376 aaKnown RBP8.08□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gm44973A0A140LJJ1 189 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Olfr1179A2AUS6 307 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Nhsl2B1AXH1 854 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Zscan29E9Q5B4 869 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Vmn2r39L7N2E5 861 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Klf6O08584 283 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Sema4dO09126 861 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Krt18P05784 423 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Sod2P09671 222 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 RapsnP12672 412 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Rplp0P14869 317 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Hspa1bP17879 642 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Ctnnd1P30999 938 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 SsbP32067 415 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Kif4P33174 1231 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Egfbp2P36368 261 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 PnmtP40935 295 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Psmc2P46471 433 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Anxa5P48036 319 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Csrp3P50462 194 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Slc16a1P53986 493 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Dnaja1P63037 397 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Nxpe4Q52KP5 543 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Mex3bQ69Z36 601 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Sohlh1Q6IUP1 357 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Fgd5Q80UZ0 1219 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Znf569Q80W31 679 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Pank4Q80YV4 820 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Vmn2r43Q80Z08 845 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Erlin2Q8BFZ9 340 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Thap3Q8BJ25 218 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Pla2g3Q8BZT7 504 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Tmx4Q8C0L0 335 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 ClasrpQ8CFC7 668 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Gtse1Q8R080 741 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Olfr351Q8VGK1 310 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Asb11Q9CQ31 323 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Znf524Q9D0B1 321 aa8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Polr2dQ9D7M8 142 aaKnown RBP8.07□□□□□ -1.12
Scn8a-202ENSMUST00000096198 Chst11Q9JME2 352 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms