RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Myh7Q91Z83 1935 aa7.46□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Scn10aQ6QIY3 1958 aa7.46□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Slc25a53A2AF28 346 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Mageb2A2AHM0 380 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Rhox3hL7MU37 215 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Sept1P42209 366 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Lhx3P50481 400 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Limk1P53668 647 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Lzts1P60853 599 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Xkr4Q5GH67 647 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Dusp16Q6PCP3 660 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Abhd17bQ7M759 288 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ppm1eQ80TL0 749 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Clec2eQ80XD9 204 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 BspryQ80YW5 473 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Dusp28Q8BTR5 163 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ankrd33Q8BXP5 385 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 MepceQ8K3A9 666 aaKnown RBP7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Map3k21Q8VDG6 1002 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ccar2Q8VDP4 922 aaKnown RBP7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Slc44a4Q91VA1 707 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Senp2Q91ZX6 588 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Prmt7Q922X9 692 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Hdac9Q99N13 588 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Pcgf6Q99NA9 353 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Rhobtb3Q9CTN4 611 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tbc1d20Q9D9I4 402 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Timp4Q9JHB3 224 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Usp14Q9JMA1 493 aaKnown RBP7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Nfe2l3Q9WTM4 660 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 PtgfrnQ9WV91 879 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Znf521Q6KAS7 1311 aa7.46□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Igkv4-61A0A0G2JH00 117 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ttc17E9PVB5 1198 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Erich2E9Q1A6 463 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Pgbd1E9Q492 415 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 E9QMW4 1145 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ube3aO08759 870 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Mmp8O70138 465 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 SfnO70456 248 aaKnown RBP7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Fpr-rs3O88537 343 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Dnajc2P54103 621 aaKnown RBP7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Trpv5P69744 723 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Cct5P80316 541 aaKnown RBP7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 FapP97321 761 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Fgfr4Q03142 799 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Fam83bQ0VBM2 1012 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tmprss12Q3V0Q7 336 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Lrrc47Q505F5 581 aaKnown RBP7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Foxg1Q60987 481 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Itga3Q62470 1053 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Il11ra1Q64385 432 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Spty2d1Q68FG3 682 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Olfr1287Q7TQY1 305 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Usp8Q80U87 1080 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Zfp438Q8BFX2 798 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Creg2Q8BGC9 288 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Frmd3Q8BHD4 595 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Slc18a2Q8BRU6 517 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Slc41a2Q8BYR8 573 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 9030612E09RikQ8CE20 140 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Rcor1Q8CFE3 480 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Sox30Q8CGW4 782 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Thoc3Q8VE80 351 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Olfr1448Q8VFX1 314 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 As3mtQ91WU5 376 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tmem98Q91X86 226 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ndfip2Q91ZP6 311 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Wdr45bQ9CR39 344 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Fam3bQ9D309 235 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Asah2Q9JHE3 756 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Sars2Q9JJL8 518 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ccne2Q9Z238 404 aa7.45□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tsc2Q61037 1814 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Krtap16-1A2A5X5 502 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Heatr4E9Q357 955 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Gm21915J3QPM7 133 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 MaffO54791 156 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Olfm1O88998 485 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Igsf11P0C673 428 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Hoxa11P31311 313 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 GhrhrP32082 423 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Kcnj9P48543 393 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Timm10P62073 90 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Kpnb1P70168 876 aaKnown RBP7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Folr2Q05685 251 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 MidnQ3TPJ7 465 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Gm10645Q3UPY1 145 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ubtfl1Q3USZ2 394 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Oog3Q3UWY1 500 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Slc10a5Q5PT54 434 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Mctp2Q5RJH2 878 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 ShhQ62226 437 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Uts2bQ765I1 113 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Mxd3Q80US8 206 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Kbtbd13Q8C828 458 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Bicdl2Q8CHW5 507 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Edc3Q8K2D3 508 aaKnown RBP7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ca9Q8VHB5 437 aa7.44□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Klhdc8aQ91XA8 350 aa7.44□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms