RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Txndc8Q69AB2 127 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Plppr4Q7TME0 766 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mrgprb8Q7TN51 330 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Akap7Q7TN79 314 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ugt2a1Q80X89 528 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Arhgap22Q8BL80 702 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Neto2Q8BNJ6 525 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Uba3Q8C878 462 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ccdc63Q8CDV6 558 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Plbd1Q8VCI0 550 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Socs7Q8VHQ2 579 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc34a2Q9DBP0 697 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gpr45Q9EQQ4 373 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Spag6Q9JLI7 507 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ripk3Q9QZL0 486 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Prdm14E9Q3T6 561 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mknk1O08605 427 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Axin1O35625 863 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Psmc3O88685 442 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Hoxc6P10629 235 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gria2P23819 883 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gna13P27601 377 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Eci1P42125 289 aaKnown RBP8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Psma2P49722 234 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gcnt3Q5JCT0 437 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mief2Q5NCS9 454 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 PigaQ64323 485 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ccdc116Q80X53 541 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Atp2c1Q80XR2 918 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ireb2Q811J3 963 aaKnown RBP8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc4a7Q8BTY2 1034 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc9a4Q8BUE1 797 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tmem154Q8C4Q9 181 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Bhlhe22Q8C6A8 355 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Aph1bQ8C7N7 257 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Asb2Q8K0L0 634 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Snapc1Q8K0S9 389 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mkl1Q8K4J6 964 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gtse1Q8R080 741 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Snx15Q91WE1 337 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Socs4Q91ZA6 436 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 HlcsQ920N2 722 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tspan1Q99J59 240 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ifi44lQ9BDB7 447 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 ProzQ9CQW3 399 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Atg7Q9D906 698 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Bace2Q9JL18 514 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Cpsf3Q9QXK7 684 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Fkbp9Q9Z247 570 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Kcnq2Q9Z351 759 aa8.39□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm6657A0A1B0GRJ3 277 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ptpn3A2ALK8 913 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Neu1O35657 409 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 SpibO35906 267 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Hoxd12P23812 268 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 MafbP54841 323 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Clec4fP70194 548 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Coq7P97478 217 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc38a5Q3U1J0 479 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mettl17Q3U2U7 461 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Trim67Q505D9 768 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 TxlngQ8BHN1 524 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Sdhaf2Q8C6I2 164 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Samd4aQ8CBY1 711 aaKnown RBP8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Colgalt1Q8K297 617 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Fam83aQ8K2P2 436 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Snx9Q91VH2 595 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 FdpsQ920E5 353 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rnf31Q924T7 1066 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Lactb2Q99KR3 288 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rsl24d1Q99L28 163 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rilpl2Q99LE1 197 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3404Q9D506 307 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 CsadQ9DBE0 493 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tdp2Q9JJX7 370 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Stap1Q9JM90 297 aaKnown RBP8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Dpp6Q9Z218 804 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm12394A2AKP6 982 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Hsd17b14E9Q3D4 273 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 AunipE9Q6Z5 340 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Zfp946F6VWU8 523 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm10479K7N6H4 105 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Pknox1O70477 436 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Hdac3O88895 424 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Csf1rP09581 977 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Cyp2b10P12791 500 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 MutP16332 748 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc2a3P32037 493 aaKnown RBP8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rab12P35283 243 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gucy2eP52785 1108 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Smad1P70340 465 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Psmb4P99026 264 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tmem102Q3UPR7 509 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slfn4Q3UV66 602 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Heatr9Q5QNV8 569 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Map3k10Q66L42 940 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Nudt16Q6P3D0 195 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Baiap2l2Q80Y61 522 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 StgQ8BM15 349 aa8.38□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Cabcoco1Q8CDT7 208 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms