RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Znf622Q91VY9 476 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hdac11Q91WA3 347 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cog2Q921L5 731 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rsl24d1Q99L28 163 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 PlgrktQ9D3P8 147 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tsga13Q9DA17 273 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slc25a19Q9DAM5 318 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Fundc1Q9DB70 155 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Eif4e3Q9DBB5 207 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nrip2Q9JHR9 270 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trem1Q9JKE2 230 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 IkbkeQ9R0T8 717 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mta2Q9R190 668 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cylc2B1AWN8 422 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 A930018M24RikB7ZMY3 218 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm21293E9Q4G9 266 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr726E9Q8X3 321 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hsd17b7O88736 334 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 FlgP11088 336 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Oas1aP11928 367 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Klrb1bP27812 223 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr725Q05A45 321 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cep295nlQ497N6 533 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 DcstampQ7TNJ0 470 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Il17reQ8BH06 637 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ankrd52Q8BTI7 1076 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Oas1gQ8K469 367 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Sbk1Q8QZX0 417 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Zdhhc12Q8VC90 267 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trim7Q923T7 510 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Kif19Q99PT9 997 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Acot13Q9CQR4 140 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 LrgukQ9D5S7 820 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Syde1Q9DBZ9 737 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Actl7aQ9QY84 440 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slfn2Q9Z0I6 378 aa11.02□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ms4a4aA0A087WRT7 236 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm6205E9PZS2 359 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr731F8VQB9 326 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mup13L7N222 235 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Dnase1l3O55070 310 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hcn4O70507 1186 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tgm2P21981 686 aaKnown RBP11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Frg1P97376 258 aaKnown RBP11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Lypla1P97823 230 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gpd1lQ3ULJ0 351 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mansc4Q3UU94 337 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mtnr1aQ61184 353 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nrg1Q6DR99 700 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Epb41l5Q8BGS1 731 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tmem209Q8BRG8 561 aaKnown RBP11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pyhin1Q8BV49 420 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tmc7Q8C428 726 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm6367Q8C6L9 287 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 KyQ8C8H8 661 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 GcshQ91WK5 170 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Vps28Q9D1C8 221 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Egfl7Q9QXT5 275 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ighv11-1A0A075B5R6 117 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Klhl18A0A0G2JGN5 579 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slc4a11A2AJN7 862 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 AmacrO09174 381 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Klc2O88448 599 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 GsnP13020 780 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slc16a1P53986 493 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pdss1Q33DR2 409 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pdlim7Q3TJD7 457 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Akap14Q3V0I7 536 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Uimc1Q5U5Q9 727 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Q6GQU0 248 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Zdhhc17Q80TN5 632 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tgm6Q8BM11 706 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Acad9Q8JZN5 625 aaKnown RBP11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ipo11Q8K2V6 975 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 LzicQ8K3C3 190 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pcdha1Q91Y21 948 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Q9CQC3 228 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 BlvraQ9CY64 295 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gprc5dQ9JIL6 344 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ripk3Q9QZL0 486 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Apobec2Q9WV35 224 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Racgap1Q9WVM1 628 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Shank3Q4ACU6 1730 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Stx7O70439 261 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 AvilO88398 819 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 PdgfrbP05622 1098 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slc10a3P21129 473 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hsd11b2P51661 386 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 B3gntl1Q3U129 357 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Creb3Q61817 404 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gstt1Q64471 240 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Fads6Q80UG1 342 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trim14Q8BVW3 440 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cog4Q8R1U1 785 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr348Q8VGK3 313 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pth2rQ91V95 546 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nipsnap3bQ9CQE1 247 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rnf138rt1Q9D9M9 248 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rgs3Q9DC04 966 aa11.01□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ifi30Q9ESY9 248 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms