RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, human

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN1A-222	ENST00000642141	TMEM131	Q92545	1883 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141		A0A1B0GTQ1	180 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141		A0A1W2PQU0	124 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ILVBL	A1L0T0	632 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	SDC3	O75056	442 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZNF821	O75541	412 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	LEFTY1	O75610	366 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZMPSTE24	O75844	475 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	PCDH8	O95206	1070 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ITGAV	P06756	1048 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	RECQL	P46063	649 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	VASP	P50552	380 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	HDAC4	P56524	1084 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	CLDN6	P56747	220 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	CLDN2	P57739	230 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ARF5	P84085	180 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	STAT4	Q14765	748 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ARL13B	Q3SXY8	428 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	PIP5KL1	Q5T9C9	394 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	C22orf39	Q6P5X5	142 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	WDR59	Q6PJI9	974 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	TRIM72	Q6ZMU5	477 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZNF354C	Q86Y25	554 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	EID2	Q8N6I1	236 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	KDF1	Q8NAX2	398 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ADAMTS14	Q8WXS8	1223 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	CCDC114	Q96M63	670 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	ELF4	Q99607	663 aa	Predicted RBP	10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	DYRK4	Q9NR20	520 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	TAS2R14	Q9NYV8	317 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	IL36A	Q9UHA7	158 aa		10.51	□□□□□ -0.73
SCN1A-222	ENST00000642141	LRRC10B	A6NIK2	292 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SRRM3	A6NNA2	597 aa	Predicted RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	ALOX15B	O15296	676 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SLC7A4	O43246	635 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	TNFSF14	O43557	240 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	LAT	O43561	262 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	PCDHGA12	O60330	932 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	LRIG2	O94898	1065 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	MBD3	O95983	291 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	PRNP	P04156	253 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	GPD1	P21695	349 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SERPINH1	P50454	418 aa	Known RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	NXPH1	P58417	271 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	RPL7A	P62424	266 aa	Known RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SCAP	Q12770	1279 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	DNAJC3	Q13217	504 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SLC45A4	Q5BKX6	768 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	CARD16	Q5EG05	197 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SEL1L3	Q68CR1	1132 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	NAPEPLD	Q6IQ20	393 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	RETSAT	Q6NUM9	610 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	CAVIN1	Q6NZI2	390 aa	Known RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	DNAJC24	Q6P3W2	148 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	DHRS13	Q6UX07	377 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	ARC	Q7LC44	396 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	GLRX5	Q86SX6	157 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	PHF13	Q86YI8	300 aa	Predicted RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	MFSD2A	Q8NA29	543 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	TMIE	Q8NEW7	156 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	CENPI	Q92674	756 aa	Predicted RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	MCEE	Q96PE7	176 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	ERGIC2	Q96RQ1	377 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	OSBPL2	Q9H1P3	480 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZDHHC6	Q9H6R6	413 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	HECA	Q9UBI9	543 aa	Predicted RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	FTSJ1	Q9UET6	329 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	IGF2R	P11717	2491 aa		10.5	□□□□□ -0.73
SCN1A-222	ENST00000642141	SIGLEC16	A6NMB1	481 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	C10orf142	B7Z368	130 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	PRAMEF26	H0Y7S4	382 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	TAF4	O00268	1085 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	KRIT1	O00522	736 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CCP110	O43303	1012 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	ATMIN	O43313	823 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CREB3	O43889	395 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	DFNA5	O60443	496 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	LDOC1	O95751	146 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CD160	O95971	181 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CALB1	P05937	261 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	RHOQ	P17081	205 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	TNFAIP3	P21580	790 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	PTPN9	P43378	593 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	ARRB1	P49407	418 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CCNH	P51946	323 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	OGDH	Q02218	1023 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	POLD3	Q15054	466 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZNF284	Q2VY69	593 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	SETMAR	Q53H47	684 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	ZNF542P	Q5EBM4	170 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	LRRC73	Q5JTD7	316 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	MANEAL	Q5VSG8	457 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	FBXL19	Q6PCT2	694 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	DCUN1D2	Q6PH85	259 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	KDM7A	Q6ZMT4	941 aa		10.49	□□□□□ -0.73
SCN1A-222	ENST00000642141	ERN2	Q76MJ5	926 aa	Known RBP	10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms