RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	SLC22A17	Q8WUG5	538 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	GOLGA1	Q92805	767 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	KLHL5	Q96PQ7	755 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	BARX1	Q9HBU1	254 aa	Predicted RBP	6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	ARFGAP3	Q9NP61	516 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	TMEM140	Q9NV12	185 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	KCND2	Q9NZV8	630 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	ADAM28	Q9UKQ2	775 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	SORCS3	Q9UPU3	1222 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	RUVBL1	Q9Y265	456 aa	Known RBP	6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	CRYL1	Q9Y2S2	319 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	HES2	Q9Y543	173 aa		6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	6.69	□□□□□ -1.34
CASC19-238	ENST00000641523	ITIH6	Q6UXX5	1313 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	ARID2	Q68CP9	1835 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523		A0A1W2PPL8	197 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523		H0YCG3	227 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523		K7ERI5	159 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	TRAPPC3	O43617	180 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	TADA2A	O75478	443 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	CNOT4	O95628	575 aa	Known RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	TH	P07101	528 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	VSIG10L2	P0DP72	767 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	GYPE	P15421	78 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	EPCAM	P16422	314 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	ABCD1	P33897	745 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	RAD52	P43351	418 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	ARL6IP4	Q66PJ3	421 aa	Known RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	MCTP1	Q6DN14	999 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	FUT10	Q6P4F1	479 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	GALNT5	Q7Z7M9	940 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	RNF168	Q8IYW5	571 aa	Predicted RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	OR2C3	Q8N628	320 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	TBC1D20	Q96BZ9	403 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	UROC1	Q96N76	676 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	CCDC94	Q9BW85	323 aa	Predicted RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	VPS11	Q9H270	941 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	POMK	Q9H5K3	350 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	PDZD7	Q9H5P4	517 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	DDX19A	Q9NUU7	478 aa	Known RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	MARCH5	Q9NX47	278 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	ZDHHC7	Q9NXF8	308 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	GPRC5B	Q9NZH0	403 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	NCDN	Q9UBB6	729 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	ADAM29	Q9UKF5	820 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	CNOT6	Q9ULM6	557 aa	Known RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	KCTD3	Q9Y597	815 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	SNX13	Q9Y5W8	968 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	FAM186A	A6NE01	2351 aa		6.68	□□□□□ -1.34
CASC19-238	ENST00000641523	F2RL2	O00254	374 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	FFAR3	O14843	346 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	TEX28	O15482	410 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	FRS3	O43559	492 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	B4GALT3	O60512	393 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	RECQL4	O94761	1208 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	INMT	O95050	263 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	GLDC	P23378	1020 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SLC7A1	P30825	629 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	CTXN1	P60606	82 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	BTK	Q06187	659 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	LIN9	Q5TKA1	542 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	ATF7IP2	Q5U623	682 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	ATG14	Q6ZNE5	492 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	USP30	Q70CQ3	517 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	RTL10	Q7L3V2	364 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	PPP1R3B	Q86XI6	285 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	NDUFAF2	Q8N183	169 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	KLHL36	Q8N4N3	616 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	C4orf32	Q8N8J7	132 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	DCBLD1	Q8N8Z6	715 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	OR5M3	Q8NGP4	307 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	ATRIP	Q8WXE1	791 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	UBXN10	Q96LJ8	280 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	AK8	Q96MA6	479 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	TTPAL	Q9BTX7	342 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	VN1R3	Q9BXE9	311 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SLC6A15	Q9H2J7	730 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SARS2	Q9NP81	518 aa	Known RBP	6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SLC38A7	Q9NVC3	462 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	IGSF9	Q9P2J2	1179 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	RAPGEFL1	Q9UHV5	662 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SMC3	Q9UQE7	1217 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	TNFSF13B	Q9Y275	285 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	GVINP1	Q7Z2Y8	2422 aa		6.67	□□□□□ -1.34
CASC19-238	ENST00000641523	SH3D21	A4FU49	640 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	CCDC169	A6NNP5	214 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	C2CD4D	B7Z1M9	353 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	TMEM189-UBE2V1	I3L0A0	370 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	TOR1B	O14657	336 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	JUN	P05412	331 aa	Known RBP	6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	HNRNPA1	P09651	372 aa	Known RBP eCLIP	6.66	□□□□□ -1.34	1e-5	■■■□□ 15.8
CASC19-238	ENST00000641523	ABCB4	P21439	1286 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	ATIC	P31939	592 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	ADAM8	P78325	824 aa		6.66	□□□□□ -1.34
CASC19-238	ENST00000641523	MESP2	Q0VG99	397 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms