RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ERVW-1Q9UQF0 538 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 R3HDM2Q9Y2K5 976 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 BCLAF3A2AJT9 711 aaKnown RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 KCNK1O00180 336 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 RNF103O00237 685 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 SNAP91O60641 907 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 ATG13O75143 517 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 TMCC1O94876 653 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 JCHAINP01591 159 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 CISD3P0C7P0 127 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 RBL1P28749 1068 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 TIE1P35590 1138 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 TUBB4BP68371 445 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 DR1Q01658 176 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 PRKD1Q15139 912 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 P3H1Q32P28 736 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 INO80DQ53TQ3 878 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 DSG4Q86SJ6 1040 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 NKD2Q969F2 451 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 P2RY11Q96G91 374 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 RPL10LQ96L21 214 aaKnown RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 GDAP1L1Q96MZ0 367 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 KRT12Q99456 494 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 DDX47Q9H0S4 455 aaKnown RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 NT5MQ9NPB1 228 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 PAK5Q9P286 719 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 ZNF212Q9UDV6 495 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
PHGDH-218ENST00000641491 UTP11Q9Y3A2 253 aaKnown RBP13.19□□□□□ -0.3
PHGDH-218ENST00000641491 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 DOCK8Q8NF50 2099 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 KANSL1LA0AUZ9 987 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 J3KR12 359 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 TRIM24O15164 1050 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 MAFKO60675 156 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 OPHN1O60890 802 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 EPHX1P07099 455 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 CES1P23141 567 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 NFKBIAP25963 317 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 TMEM196Q5HYL7 178 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 ADIPOR2Q86V24 386 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 PCDH20Q8N6Y1 951 aaKnown RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 KDM1BQ8NB78 822 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 AGAP3Q96P47 875 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 HERPUD2Q9BSE4 406 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 CARD6Q9BX69 1037 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 RAB17Q9H0T7 212 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 DYRK4Q9NR20 520 aa13.18□□□□□ -0.3
PHGDH-218ENST00000641491 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 FCF1Q9Y324 198 aaKnown RBP13.18□□□□□ -0.3
PHGDH-218ENST00000641491 A0A0A0MRY4 1105 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 EDDM13A0A1B0GTR0 161 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 EGFP01133 1207 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 GLDCP23378 1020 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 IFI35P80217 286 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-218ENST00000641491 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
PHGDH-218ENST00000641491 ARF5P84085 180 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 ZXDAP98168 799 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 SIGLEC14Q08ET2 396 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
PHGDH-218ENST00000641491 GRM3Q14832 879 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 IER5LQ5T953 404 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-218ENST00000641491 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 B4GALNT4Q76KP1 1039 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.17□□□□□ -0.3
PHGDH-218ENST00000641491 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 OR8D1Q8WZ84 308 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 EDAQ92838 391 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms