RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ZNF564Q8TBZ8 553 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-212ENST00000641247 TMC2Q8TDI7 906 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 ANKRD7Q92527 254 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 AZIN2Q96A70 460 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 ALG14Q96F25 216 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 CCDC3Q9BQI4 270 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 FOXP3Q9BZS1 431 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 NIF3L1Q9GZT8 377 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 KCTD10Q9H3F6 313 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 CISHQ9NSE2 258 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 SALL4Q9UJQ4 1053 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 TSPAN16Q9UKR8 245 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 ACSL6Q9UKU0 697 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 PLAAQ9Y263 795 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 UBE4BO95155 1302 aa9.97□□□□□ -0.81
PHGDH-212ENST00000641247 TEP1Q99973 2627 aaKnown RBP9.96□□□□□ -0.81
PHGDH-212ENST00000641247 A0A1W2PQM1 296 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 GOLGA6L19H0YKK7 550 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 XPO1O14980 1071 aaKnown RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 MCF2LO15068 1137 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 AQP9O43315 295 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 KRT38O76015 456 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 SFTPCP11686 197 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 LCP1P13796 627 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 NME1P15531 152 aaKnown RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 PDGFRAP16234 1089 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 ITIH1P19827 911 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 HNRNPA2B1P22626 353 aaKnown RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 ETV5P41161 510 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 SLC11A2P49281 568 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 HNRNPKP61978 463 aaKnown RBP eCLIP9.96□□□□□ -0.823e-7■□□□□ 8.5
PHGDH-212ENST00000641247 EIF2B5Q13144 721 aaKnown RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 GOLGA7BQ2TAP0 167 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 RAB11FIP2Q7L804 512 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 CIR1Q86X95 450 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 DTX1Q86Y01 620 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 JAMLQ86YT9 394 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 UNC45BQ8IWX7 931 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 RBFAQ8N0V3 343 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 KIAA0895Q8NCT3 520 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 TPCN2Q8NHX9 752 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 LMX1AQ8TE12 382 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 IFT43Q96FT9 208 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 LIN37Q96GY3 246 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 BOCQ9BWV1 1114 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 IRX2Q9BZI1 471 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-212ENST00000641247 MMRN2Q9H8L6 949 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 LRRC4Q9HBW1 653 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 PREBQ9HCU5 417 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 FOXJ2Q9P0K8 574 aa9.96□□□□□ -0.82
PHGDH-212ENST00000641247 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 TLN1Q9Y490 2541 aaKnown RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 USP9YO00507 2555 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 PRAMEF33A0A0G2JMD5 474 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 SPTY2D1-AS1A0A0U1RR47 76 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 KIF2AO00139 706 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 CTIFO43310 598 aaKnown RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 ATP9BO43861 1147 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 PRAMEF10O60809 474 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 PAK4O96013 591 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 MT-CO1P00395 513 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 CELA2BP08218 269 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 RNF224P0DH78 156 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 LIPCP11150 499 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 POU3F2P20265 443 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 AKT2P31751 481 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 CASRP41180 1078 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 PPP1R2P41236 205 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 RGS7P49802 495 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 TPM4P67936 248 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 MYL5Q02045 173 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 STIM1Q13586 685 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 NCAPHQ15003 741 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 NR0B2Q15466 257 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 DLG2Q15700 870 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 ACCSLQ4AC99 568 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 COBLL1Q53SF7 1204 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 TEX35Q5T0J7 233 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 RNF219Q5W0B1 726 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 RAP1GAP2Q684P5 730 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 NUGGCQ68CJ6 796 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 PMF1Q6P1K2 205 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 Q6ZVU0 165 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 SMYD4Q8IYR2 804 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 KRT222Q8N1A0 295 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 ZNF557Q8N988 423 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 ENOX1Q8TC92 643 aaKnown RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 TMEM174Q8WUU8 243 aa9.95□□□□□ -0.82
PHGDH-212ENST00000641247 JPH3Q8WXH2 748 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-212ENST00000641247 KCTD13Q8WZ19 329 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms