RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KCTD11Q693B1 232 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 SPATA6LQ8N4H0 392 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 PCDH20Q8N6Y1 951 aaKnown RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 TRPM4Q8TD43 1214 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 DDI1Q8WTU0 396 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 EME1Q96AY2 570 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 GPR22Q99680 433 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 APBA2Q99767 749 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 SUDS3Q9H7L9 328 aaPredicted RBP11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ADA2Q9NZK5 511 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 XPR1Q9UBH6 696 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
SNIP1-204ENST00000638725 ARHGAP10A1A4S6 786 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 KCNU1A8MYU2 1149 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 DLX3O60479 287 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 DAB1O75553 588 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CNMDO75829 334 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 SLC35E2BP0CK96 405 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 NFKB1P19838 968 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 FGFR3P22607 806 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 NDUFV1P49821 464 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CSRP3P50461 194 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ZBTB17Q13105 803 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 VGLL4Q14135 290 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 EML3Q32P44 896 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ZC3HC1Q86WB0 502 aaKnown RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 SLC41A1Q8IVJ1 513 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CHERPQ8IWX8 916 aaKnown RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CENPLQ8N0S6 344 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 RNF169Q8NCN4 708 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 RDH11Q8TC12 318 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 HSFY1Q96LI6 401 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF512Q96ME7 567 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 TSNARE1Q96NA8 513 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 MPHOSPH6Q99547 160 aaKnown RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 OMDQ99983 421 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 PCDHAC1Q9H158 963 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 PIGVQ9NUD9 493 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 GINS2Q9Y248 185 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 FIS1Q9Y3D6 152 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CEPT1Q9Y6K0 416 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 SCN4AP35499 1836 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 UTRNP46939 3433 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 TRIM38O00635 465 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 DDHD2O94830 711 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF286BP0CG31 522 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ADSLP30566 484 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 GNL1P36915 607 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 RFTN1Q14699 578 aaPredicted RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 LRRC8EQ6NSJ5 796 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 NPWQ8N729 165 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 CNTD1Q8N815 330 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 KDM1BQ8NB78 822 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 SNX27Q96L92 541 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 NPY6RQ99463 290 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 EIF2AQ9BY44 585 aaKnown RBP11.08□□□□□ -0.64
SNIP1-204ENST00000638725 COQ10BQ9H8M1 238 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 ANLNQ9NQW6 1124 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 VTI1BQ9UEU0 232 aa11.08□□□□□ -0.64
SNIP1-204ENST00000638725 TARM1B6A8C7 271 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
SNIP1-204ENST00000638725 CLDN5O00501 218 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SDHDO14521 159 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SPTLC1O15269 473 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 CDH2P19022 906 aaPredicted RBP11.07□□□□□ -0.64
SNIP1-204ENST00000638725 GABRB3P28472 473 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 HK2P52789 917 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 CREB5Q02930 508 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 FRG1Q14331 258 aaKnown RBP11.07□□□□□ -0.64
SNIP1-204ENST00000638725 DGKDQ16760 1214 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SH2D4BQ5SQS7 431 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 C9orf57Q5W0N0 161 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 KLC3Q6P597 504 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 LRRC52Q8N7C0 313 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 BEST2Q8NFU1 509 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 CEP70Q8NHQ1 597 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 GAB3Q8WWW8 586 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 LRTOMTQ8WZ04 291 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 TMIGD2Q96BF3 282 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 GBA3Q9H227 469 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 EPS15L1Q9UBC2 864 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 ANKRD6Q9Y2G4 727 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 PCDHGA7Q9Y5G6 932 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 A0A0J9YVX5 310 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 E7ENX8 843 aa11.07□□□□□ -0.64
SNIP1-204ENST00000638725 SLCO1B7G3V0H7 640 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms