RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CLDN5O00501 218 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 DNAJA2O60884 412 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 SMIM18P0DKX4 95 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 COL6A2P12110 1019 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 CD1EP15812 388 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 XRCC1P18887 633 aaPredicted RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 NSUN2Q08J23 767 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 GALNT2Q10471 571 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 CDH17Q12864 832 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 ZBTB17Q13105 803 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 MAP7Q14244 749 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 RFTN1Q14699 578 aaPredicted RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 NAPEPLDQ6IQ20 393 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 CLEC20AQ6ZU45 233 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 SATL1Q86VE3 508 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 ADCY4Q8NFM4 1077 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 RIMS3Q9UJD0 308 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 SBF1O95248 1867 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 HOXD8P13378 290 aaPredicted RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 YY1P25490 414 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 NMBRP28336 390 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 TKTL1P51854 596 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 NAGLUP54802 743 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 MRPS22P82650 360 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 SLC12A1Q13621 1099 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 USP10Q14694 798 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 XKR4Q5GH76 650 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 PAQR9Q6ZVX9 377 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 DGCR14Q96DF8 476 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 OSMRQ99650 979 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 APOL2Q9BQE5 337 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 CDHR5Q9HBB8 845 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 ZBTB26Q9HCK0 441 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 ZDHHC2Q9UIJ5 367 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 FBXW11Q9UKB1 542 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 TMCO1Q9UM00 188 aa20.44■□□□□ 0.86
SYNGAP1-227ENST00000638142 C9IYK1 514 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 FYNP06241 537 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 DARSP14868 501 aaKnown RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 PMLP29590 882 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 AXLP30530 894 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 GJA9P57773 515 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 TICAM1Q8IUC6 712 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 SCYL1Q96KG9 808 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 PPP1R36Q96LQ0 422 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 TEKT5Q96M29 485 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 KIFC1Q9BW19 673 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 WDR41Q9HAD4 459 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 EFCAB1Q9HAE3 211 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 ANLNQ9NQW6 1124 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 KLK14Q9P0G3 267 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 MAGED2Q9UNF1 606 aaPredicted RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 MMP3P08254 477 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 SLC35E2BP0CK96 405 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 ME2P23368 584 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 RPL5P46777 297 aaKnown RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 ZNF135P52742 658 aaPredicted RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 LILRA4P59901 499 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 PRPSAP1Q14558 356 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 ARL13BQ3SXY8 428 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 CNTD1Q8N815 330 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 PDCD6IPQ8WUM4 868 aaKnown RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 GOLGA2P5Q9HBQ8 144 aa20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.43■□□□□ 0.86
SYNGAP1-227ENST00000638142 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 TARM1B6A8C7 271 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 I6L893 689 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 NRP1O14786 923 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PSMD3O43242 534 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 AMHP03971 560 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 TPH1P17752 444 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 RGS2P41220 211 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 CCR10P46092 362 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 SOX4Q06945 474 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 CEACAM7Q14002 265 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 UGP2Q16851 508 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 LINC00523Q86TU6 105 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 MOCOSQ96EN8 888 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PGAP3Q96FM1 320 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PRICKLE1Q96MT3 831 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 CATSPER2Q96P56 530 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 APBA2Q99767 749 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PLK2Q9NYY3 685 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 G3BP2Q9UN86 482 aaKnown RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PHF24Q9UPV7 400 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 RUVBL2Q9Y230 463 aaKnown RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 PHGDHO43175 533 aaKnown RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 BCAS2O75934 225 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 CRTAMO95727 393 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 ENO3P13929 434 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 HSPA13P48723 471 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 POLD2P49005 469 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 ART3Q13508 389 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 FSTL5Q8N475 847 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 ADAM32Q8TC27 787 aa20.42■□□□□ 0.86
SYNGAP1-227ENST00000638142 KCTD4Q8WVF5 259 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms