RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 MAN2B2Q9Y2E5 1009 aa15.29■□□□□ 0.04
UBE3A-227ENST00000638011 TOP3BO95985 862 aaKnown RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 HUNKP57058 714 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 CFL2Q9Y281 166 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 CASKO14936 926 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ULK1O75385 1050 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 FMR1Q06787 632 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■■■□□ 15.2
UBE3A-227ENST00000638011 KCNA10Q16322 511 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 RHBDF1Q96CC6 855 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 TMEM47Q9BQJ4 181 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 NAMPTP43490 491 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 MTX3Q5HYI7 312 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 SNX32Q86XE0 403 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 CD320Q9NPF0 282 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 SH3BP1Q9Y3L3 701 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PRH1P02810 166 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 TMEM110Q86TL2 294 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 GDF3Q9NR23 364 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PRKD3O94806 890 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 OR6A2O95222 327 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 HSD17B12Q53GQ0 312 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF521Q96K83 1311 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 SNX6Q9UNH7 406 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PPEF2O14830 753 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ADAM8P78325 824 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 C11orf96Q7Z7L8 435 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 CCDC3Q9BQI4 270 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 TRIM38O00635 465 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ITGA10O75578 1167 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 SLC2A4P14672 509 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF614Q8N883 585 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF548Q8NEK5 533 aaPredicted RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
UBE3A-227ENST00000638011 PSMD13Q9UNM6 376 aa15.28■□□□□ 0.04
UBE3A-227ENST00000638011 FAM20CQ8IXL6 584 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 ZNF615Q8N8J6 731 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 SCGB3A2Q96PL1 93 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
UBE3A-227ENST00000638011 CHADO15335 359 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 ITGAVP06756 1048 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 MAGEA12P43365 314 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 VPS26BQ4G0F5 336 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 ADGRF4Q8IZF3 695 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 VPS35Q96QK1 796 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 LYVE1Q9Y5Y7 322 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 PLIN3O60664 434 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 PGDP52209 483 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 RBBP4Q09028 425 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 MTAPQ13126 283 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 TMEM44Q2T9K0 475 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 ARHGAP15Q53QZ3 475 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 NOTUMQ6P988 496 aa15.27■□□□□ 0.04
UBE3A-227ENST00000638011 MRPL57Q9BQC6 102 aaKnown RBP15.27■□□□□ 0.04
UBE3A-227ENST00000638011 CUEDC1Q9NWM3 386 aaPredicted RBP15.27■□□□□ 0.04
UBE3A-227ENST00000638011 AVPR1AP37288 418 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 LACTB2Q53H82 288 aaPredicted RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 TOR1AIP2Q8NFQ8 470 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 TRMOQ9BU70 441 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 DHX15O43143 795 aaKnown RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 CPSF4O95639 269 aaKnown RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 PRKCBP05771 671 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 PET100P0DJ07 73 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 MAZP56270 477 aaKnown RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 BLMHQ13867 455 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF234Q14588 700 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 MAPKAPK3Q16644 382 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 FAXCQ5TGI0 409 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 CYP2R1Q6VVX0 501 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 DENND5BQ6ZUT9 1274 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 METTL6Q8TCB7 284 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 CXCR2P25025 360 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 RPL26P61254 145 aaKnown RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 MED22Q15528 200 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 PFDN5Q99471 154 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 TBCCD1Q9NVR7 557 aa15.27■□□□□ 0.03
UBE3A-227ENST00000638011 MRPS7Q9Y2R9 242 aaKnown RBP15.27■□□□□ 0.03
UBE3A-227ENST00000638011 FAM172BPA6NC97 362 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 RPS6KA4O75676 772 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 GLRBP48167 497 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 NME5P56597 212 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 DCP1BQ8IZD4 617 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms