RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
CLN6-221ENST00000637494 TMEM248Q9NWD8 314 aa19.36■□□□□ 0.69
CLN6-221ENST00000637494 DNAI1Q9UI46 699 aa19.36■□□□□ 0.69
CLN6-221ENST00000637494 MSRB2Q9Y3D2 182 aa19.36■□□□□ 0.69
CLN6-221ENST00000637494 PLXNA2O75051 1894 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 A0A1B0GTQ1 180 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 TLR4O00206 839 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 RAMP2O60895 175 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 RNGTTO60942 597 aaKnown RBP19.35■□□□□ 0.69
CLN6-221ENST00000637494 ITGAVP06756 1048 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 ZNF143P52747 638 aaPredicted RBP19.35■□□□□ 0.69
CLN6-221ENST00000637494 AIF1P55008 147 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 HDAC4P56524 1084 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 OVGP1Q12889 678 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 POLD3Q15054 466 aaPredicted RBP19.35■□□□□ 0.69
CLN6-221ENST00000637494 RAB6CQ53S08 254 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 CARD16Q5EG05 197 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 ARSIQ5FYB1 569 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 MANEALQ5VSG8 457 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 NEK5Q6P3R8 708 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 RAB44Q7Z6P3 723 aaPredicted RBP19.35■□□□□ 0.69
CLN6-221ENST00000637494 IQCHQ86VS3 1027 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 CCDC185Q8N715 623 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 MFSD2AQ8NA29 543 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 GRIN3AQ8TCU5 1115 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 ADAMTS14Q8WXS8 1223 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 HEPHQ9BQS7 1158 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 RAB6CQ9H0N0 254 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 ZNF212Q9UDV6 495 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 KLK13Q9UKR3 277 aa19.35■□□□□ 0.69
CLN6-221ENST00000637494 C1QTNF9BB2RNN3 333 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 PRAMEF26H0Y7S4 382 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 TEX33O43247 280 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 CCP110O43303 1012 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 LRIG2O94898 1065 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 SERPINC1P01008 464 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 WNT1P04628 370 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 CTSLP07711 333 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 C1QTNF9P0C862 333 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 IL9RQ01113 521 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 SCAPQ12770 1279 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 ASIC2Q16515 512 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 KCNT1Q5JUK3 1230 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 DPY19L3Q6ZPD9 716 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 ERN2Q76MJ5 926 aaKnown RBP19.34■□□□□ 0.69
CLN6-221ENST00000637494 MCOLN2Q8IZK6 566 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 RYBPQ8N488 228 aaPredicted RBP19.34■□□□□ 0.69
CLN6-221ENST00000637494 CHST14Q8NCH0 376 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 VCPIP1Q96JH7 1222 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 EPAS1Q99814 870 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 CNPY3Q9BT09 278 aa19.34■□□□□ 0.69
CLN6-221ENST00000637494 A0A1W2PR77 199 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 ZSCAN5CA6NGD5 496 aaPredicted RBP19.33■□□□□ 0.68
CLN6-221ENST00000637494 LRRC53A6NM62 1247 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 TNFSF14O43557 240 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 LEFTY1O75610 366 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 ZMPSTE24O75844 475 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 PCDH8O95206 1070 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 EPHB2P29323 1055 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 L1CAMP32004 1257 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 NEK3P51956 506 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 NXPH1P58417 271 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 ARF5P84085 180 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 PIP5KL1Q5T9C9 394 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 SFMBT2Q5VUG0 894 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 FBXL19Q6PCT2 694 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 IRF2BP2Q7Z5L9 587 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 NLRP14Q86W24 1093 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 PNPLA1Q8N8W4 532 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 BAHD1Q8TBE0 780 aaPredicted RBP19.33■□□□□ 0.68
CLN6-221ENST00000637494 ARHGEF2Q92974 986 aaKnown RBP19.33■□□□□ 0.68
CLN6-221ENST00000637494 ISG20Q96AZ6 181 aaKnown RBP19.33■□□□□ 0.68
CLN6-221ENST00000637494 ARRDC3Q96B67 414 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 HDAC8Q9BY41 377 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 CATSPERBQ9H7T0 1116 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 PARVAQ9NVD7 372 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 DONSONQ9NYP3 566 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 ARHGAP20Q9P2F6 1191 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 FTSJ1Q9UET6 329 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 BTBD3Q9Y2F9 522 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 FCF1Q9Y324 198 aaKnown RBP19.33■□□□□ 0.68
CLN6-221ENST00000637494 DOCK4Q8N1I0 1966 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 PCNX2A6NKB5 2137 aa19.33■□□□□ 0.68
CLN6-221ENST00000637494 A0A1W2PQC6 194 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 GOLGA8CPA6NN73 597 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 TMCO5BA8MYB1 307 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 C10orf142B7Z368 130 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 FAM72CH0Y354 149 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 CREB3O43889 395 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 ACVRL1P37023 503 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 CCNHP51946 323 aaPredicted RBP19.32■□□□□ 0.68
CLN6-221ENST00000637494 SNRPD1P62314 119 aaKnown RBP19.32■□□□□ 0.68
CLN6-221ENST00000637494 FAM72AQ5TYM5 149 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 FAM72DQ6L9T8 149 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 HORMAD1Q86X24 394 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 FAM72BQ86X60 149 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 PLPP6Q8IY26 295 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 ZDHHC6Q9H6R6 413 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 ERVMER34-1Q9H9K5 563 aa19.32■□□□□ 0.68
CLN6-221ENST00000637494 TMEM131Q92545 1883 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms