RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 TRIM11Q96F44 468 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ACE2Q9BYF1 805 aaPredicted RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 CEP44Q9C0F1 390 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 KDM4CQ9H3R0 1056 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 CATSPERBQ9H7T0 1116 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 AASDHPPTQ9NRN7 309 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 NDFIP2Q9NV92 336 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 IFNKQ9P0W0 207 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 MYO1AQ9UBC5 1043 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 CNOT8Q9UFF9 292 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 TPX2Q9ULW0 747 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 ANKRD6Q9Y2G4 727 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 PCDHB9Q9Y5E1 797 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 BZW2Q9Y6E2 419 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 SLCO1B1Q9Y6L6 691 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ANKRD36A6QL64 1941 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 SHROOM3Q8TF72 1996 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 A0A1W2PQJ5 194 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 ZMPSTE24O75844 475 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 RNF8O76064 485 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 CD59P13987 128 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 GEMIN4P57678 1058 aaKnown RBP14.09□□□□□ -0.15
PNKP-228ENST00000637325 RACK1P63244 317 aaKnown RBP14.09□□□□□ -0.15
PNKP-228ENST00000637325 ARF5P84085 180 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 BNC1Q01954 994 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 OGDHQ02218 1023 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 KIF19Q2TAC6 998 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 ARSIQ5FYB1 569 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 PIP4P1Q86T03 277 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 RYBPQ8N488 228 aaPredicted RBP14.09□□□□□ -0.15
PNKP-228ENST00000637325 PCDH20Q8N6Y1 951 aaKnown RBP14.09□□□□□ -0.15
PNKP-228ENST00000637325 CHST14Q8NCH0 376 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 TMIEQ8NEW7 156 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 SLC6A18Q96N87 628 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 IL36AQ9UHA7 158 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 FCF1Q9Y324 198 aaKnown RBP14.09□□□□□ -0.15
PNKP-228ENST00000637325 SNX11Q9Y5W9 270 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 SCINQ9Y6U3 715 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 ACACBO00763 2458 aa14.09□□□□□ -0.15
PNKP-228ENST00000637325 PLRG1O43660 514 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 SH3BP5O60239 455 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 GJB3O75712 270 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 CTSLP07711 333 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 MYBL1P10243 752 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 PBX1P40424 430 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 TPI1P60174 286 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 ZBED6P86452 979 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 HNRNPDQ14103 355 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 SUZ12Q15022 739 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 NFKBIBQ15653 356 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 SLC45A4Q5BKX6 768 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 LAYNQ6UX15 382 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 DPY19L3Q6ZPD9 716 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 RTL3Q8N8U3 475 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 GRIN3AQ8TCU5 1115 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 SETD7Q8WTS6 366 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 SYN2Q92777 582 aaPredicted RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 PPP1R16AQ96I34 528 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 IL21RQ9HBE5 538 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 MRPL47Q9HD33 250 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 TM7SF3Q9NS93 570 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 PCSK1NQ9UHG2 260 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 ANGPTL2Q9UKU9 493 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 CAPN11Q9UMQ6 739 aa14.08□□□□□ -0.16
PNKP-228ENST00000637325 LUC7L2Q9Y383 392 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 GOLGA4Q13439 2230 aaKnown RBP14.08□□□□□ -0.16
PNKP-228ENST00000637325 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 ZSCAN5CA6NGD5 496 aaPredicted RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 VILLO15195 856 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 FGF10O15520 208 aaPredicted RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 BUB1O43683 1085 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 KDELR3O43731 214 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 LEFTY1O75610 366 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 SERPING1P05155 500 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 ZNF883P0CG24 379 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 CD38P28907 300 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 PMLP29590 882 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 MAT2AP31153 395 aaKnown RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 NUDT1P36639 197 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 PPP2CBP62714 309 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 PPP2CAP67775 309 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 SIM1P81133 766 aaPredicted RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 FOXC1Q12948 553 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 AGBL4Q5VU57 503 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 NCAPGQ9BPX3 1015 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 HEPHQ9BQS7 1158 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 ORAI3Q9BRQ5 295 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 TM6SF2Q9BZW4 377 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 DHX35Q9H5Z1 703 aaKnown RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 EBF2Q9HAK2 575 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 PREBQ9HCU5 417 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 GPATCH2LQ9NWQ4 482 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 DONSONQ9NYP3 566 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms