RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GALNT8Q9NY28 637 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 PDLIM1O00151 329 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 HOXA2O43364 376 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 UGT1A9O60656 530 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 OPHN1O60890 802 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 TBX10O75333 385 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 JCHAINP01591 159 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 OR1D2P34982 312 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 GARSP41250 739 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 MAGEA6P43360 314 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 DNAJC3Q13217 504 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 GPR17Q13304 367 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 THOC7Q6I9Y2 204 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 C4orf22Q6V702 233 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 UNC5AQ6ZN44 842 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 TDRPQ86YL5 185 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 RIBC1Q8N443 379 aaPredicted RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 MCUQ8NE86 351 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 DCAKDQ8WVC6 231 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 CYTH2Q99418 400 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 OSBPL2Q9H1P3 480 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 C12orf65Q9H3J6 166 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 UGT1A7Q9HAW7 530 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 UGT1A10Q9HAW8 530 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 UGT1A8Q9HAW9 530 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 SLC24A2Q9UI40 661 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 HS3ST4Q9Y661 456 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 ETS2P15036 469 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 KRT4P19013 534 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 TPSB2P20231 275 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 FDFT1P37268 417 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 NEK2P51955 445 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 IKBKEQ14164 716 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 BTG3Q14201 252 aaPredicted RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 TPSAB1Q15661 275 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 PSMD5Q16401 504 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 KLHL38Q2WGJ6 581 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 CES3Q6UWW8 571 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 LRRC43Q8N309 656 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 VWCEQ96DN2 955 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 CADM1Q9BY67 442 aaKnown RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 PITPNM3Q9BZ71 974 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 TRAFD1O14545 582 aaPredicted RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 MGAT1P26572 445 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 STX2P32856 288 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 VHLP40337 213 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 TUFMP49411 452 aaKnown RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 ARPC4P59998 168 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 CBX3Q13185 183 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 BRMS1LQ5PSV4 323 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 BEND5Q7L4P6 421 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 C10orf82Q8WW14 230 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 VN1R3Q9BXE9 311 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 SMYD2Q9NRG4 433 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 IL1RAPL1Q9NZN1 696 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 ZMAT5Q9UDW3 170 aaKnown RBP11.71□□□□□ -0.53
CLN6-217ENST00000636964 SCOCQ9UIL1 159 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 NEU3Q9UQ49 428 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 IKBKGQ9Y6K9 419 aa11.71□□□□□ -0.53
CLN6-217ENST00000636964 TMEM221A6NGB7 291 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 UBTFL6P0CB48 400 aaPredicted RBP11.71□□□□□ -0.54
CLN6-217ENST00000636964 ITGB8P26012 769 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 CD68P34810 354 aaPredicted RBP11.71□□□□□ -0.54
CLN6-217ENST00000636964 SERPINB6P35237 376 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 RPA3P35244 121 aaPredicted RBP11.71□□□□□ -0.54
CLN6-217ENST00000636964 MAGEA11P43364 429 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 TBX4P57082 545 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 OCRLQ01968 901 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 GALNT2Q10471 571 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 CLPPQ16740 277 aaPredicted RBP11.71□□□□□ -0.54
CLN6-217ENST00000636964 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 ANKS3Q6ZW76 656 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 TFAP2DQ7Z6R9 452 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.54
CLN6-217ENST00000636964 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 WDR60Q8WVS4 1066 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 SERPINB11Q96P15 392 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 HAPLN3Q96S86 360 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 SMC6Q96SB8 1091 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 EBNA1BP2Q99848 306 aaKnown RBP11.71□□□□□ -0.54
CLN6-217ENST00000636964 CCSER2Q9H7U1 834 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 MRGBPQ9NV56 204 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 COMMD8Q9NX08 183 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 NKIRAS1Q9NYS0 192 aa11.71□□□□□ -0.54
CLN6-217ENST00000636964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.7□□□□□ -0.54
CLN6-217ENST00000636964 KCNU1A8MYU2 1149 aa11.7□□□□□ -0.54
CLN6-217ENST00000636964 E9PAM4 449 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms