RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 FZD4Q9ULV1 537 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC12A4Q9UP95 1085 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TRPM1Q7Z4N2 1603 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CDC42BPGQ6DT37 1551 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SBF1O95248 1867 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 UBR3Q6ZT12 1888 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 DUOX2Q9NRD8 1548 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ATP10AO60312 1499 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PLA2R1Q13018 1463 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 RGS12O14924 1447 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PTPRKQ15262 1439 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MIA2Q96PC5 1412 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 COL5A3P25940 1745 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TRIP12Q14669 1992 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PAPPAQ13219 1627 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ARID4BQ4LE39 1312 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TAF1P21675 1872 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 A0A1B0GUV1 79 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 A0A1B0GVT2 93 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 AGAP5A6NIR3 686 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 LGALS16A8MUM7 142 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 BTBD18B2RXH4 712 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 KIF28PB7ZC32 967 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 M0QYT0 321 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PLA2G6O60733 806 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ATG13O75143 517 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PPP6R2O75170 966 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TAF5LO75529 589 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CER1O95813 267 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 GLP2RO95838 553 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ALDOAP04075 364 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ENO1P06733 434 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ANXA6P08133 673 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ITGA2BP08514 1039 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CHRNB1P11230 501 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CPA1P15085 419 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 NPPBP16860 134 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MATN1P21941 496 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 RPS6KB1P23443 525 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SERPINB3P29508 390 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 HTR7P34969 479 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CHKAP35790 457 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TM4SF4P48230 202 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PCP4P48539 62 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 RBM5P52756 815 aaKnown RBP eCLIP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC12A2P55011 1212 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SHC2P98077 582 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CRYZQ08257 329 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SF3A3Q12874 501 aaKnown RBP eCLIP1.23□□□□□ -2.215e-7■■■□□ 18.6
SMARCB1-209ENST00000635578 GAB1Q13480 694 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 DNASE1L3Q13609 305 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 BLMHQ13867 455 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 UBE4AQ14139 1066 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 GALNT3Q14435 633 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 KCNJ12Q14500 433 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SPARCL1Q14515 664 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 GRM4Q14833 912 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PUM3Q15397 648 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PDCD2Q16342 344 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PFKFB4Q16877 469 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 AASDHQ4L235 1098 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 GLE1Q53GS7 698 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ARL13AQ5H913 290 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 C10orf62Q5T681 223 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 LIPMQ5VYY2 423 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 C9orf57Q5W0N0 161 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 HMBOX1Q6NT76 420 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MSANTD2Q6P1R3 559 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ACSM6Q6P461 480 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF449Q6P9G9 518 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CCDC174Q6PII3 467 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SPSB3Q6PJ21 355 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 KYAT3Q6YP21 454 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 RBM44Q6ZP01 1051 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CYB5R4Q7L1T6 521 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ARMC9Q7Z3E5 817 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 RHPN2Q8IUC4 686 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ENAHQ8N8S7 591 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PRR26Q8N8Z3 221 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 OR52L2PQ8NGH6 319 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SVIPQ8NHG7 77 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 OVCA2Q8WZ82 227 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 KCNJ9Q92806 393 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PHF21BQ96EK2 531 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MCRS1Q96EZ8 462 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ZDHHC12Q96GR4 267 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF419Q96HQ0 510 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TMEM41AQ96HV5 264 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ADAD1Q96M93 576 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TRAPPC9Q96Q05 1148 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 RPS6KC1Q96S38 1066 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SENP7Q9BQF6 1050 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PIMREGQ9BSJ6 248 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM167BQ9BTA0 163 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 COLEC11Q9BWP8 271 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SORBS1Q9BX66 1292 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TMEM120AQ9BXJ8 343 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 STK33Q9BYT3 514 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TAF1DQ9H5J8 278 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MOV10Q9HCE1 1003 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms