RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MAFKO60675 156 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 PRAMEF11O60813 436 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 PDGFBP01127 241 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 CTSOP43234 321 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 IL10RBQ08334 325 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 PPIDQ08752 370 aaKnown RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 TMEM215Q68D42 235 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 TRIM67Q6ZTA4 783 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 SPATS2Q86XZ4 545 aaKnown RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 SFTPA1Q8IWL2 248 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 CCDC13Q8IYE1 715 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 SLC35B2Q8TB61 432 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 NSMCE1Q8WV22 266 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 SORCS1Q8WY21 1168 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 FAM3CQ92520 227 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 MSANTD3Q96H12 275 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 QKIQ96PU8 341 aaKnown RBP eCLIP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 RBM12Q9NTZ6 932 aaKnown RBP14.72□□□□□ -0.05
LINC00339-208ENST00000634934 ELOVL2Q9NXB9 296 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 ZNF148Q9UQR1 794 aa14.72□□□□□ -0.05
LINC00339-208ENST00000634934 PRRT4C9JH25 899 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ZMPSTE24O75844 475 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ATP5BP06576 529 aaKnown RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 CD72P21854 359 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 CCNCP24863 283 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 RBL1P28749 1068 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 KCNJ1P48048 391 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ECT2LQ008S8 904 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 SULT2A1Q06520 285 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 SIGLEC14Q08ET2 396 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 GRSF1Q12849 480 aaKnown RBP eCLIP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 PRKD1Q15139 912 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 TIGD7Q6NT04 549 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 RETSATQ6NUM9 610 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 SUGP1Q8IWZ8 645 aaKnown RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 KLHL7Q8IXQ5 586 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 CYB5D2Q8WUJ1 264 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 SEC14L1Q92503 715 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 NKD2Q969F2 451 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 TTC17Q96AE7 1141 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ACDQ96AP0 544 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 RPL10LQ96L21 214 aaKnown RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 CCDC114Q96M63 670 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 TSGA13Q96PP4 275 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ARHGEF3Q9NR81 526 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 UBA2Q9UBT2 640 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 WNT16Q9UBV4 365 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 SLC25A13Q9UJS0 675 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 RRP15Q9Y3B9 282 aaKnown RBP14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ACTL7AQ9Y615 435 aa14.71□□□□□ -0.05
LINC00339-208ENST00000634934 ZSCAN5CA6NGD5 496 aaPredicted RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 MYO1CO00159 1063 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 KCNK1O00180 336 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 MAN2B1O00754 1011 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 KCNN4O15554 427 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 TIMM44O43615 452 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 PHF2O75151 1096 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 VAV1P15498 845 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 STK19P49842 368 aaPredicted RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 ARF5P84085 180 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 EIF4HQ15056 248 aaKnown RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 HEATR6Q6AI08 1181 aaKnown RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF852Q6ZMS4 543 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 USP33Q8TEY7 942 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 UCMAQ8WVF2 138 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 HTR3CQ8WXA8 447 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 FERMT1Q9BQL6 677 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 TMEM121Q9BTD3 319 aa14.71□□□□□ -0.06
LINC00339-208ENST00000634934 DDX47Q9H0S4 455 aaKnown RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 FEZ2Q9UHY8 353 aaPredicted RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 NDRG2Q9UN36 371 aaKnown RBP14.71□□□□□ -0.06
LINC00339-208ENST00000634934 F5P12259 2224 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 BCLAF3A2AJT9 711 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 KRBA1A5PL33 1030 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 TMEM221A6NGB7 291 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 M0R296 226 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 SGK1O00141 431 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 MATN3O15232 486 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 NEBLO76041 1014 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 MT-CO1P00395 513 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 EGFP01133 1207 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 ASLP04424 464 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 DLDP09622 509 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CCNB1P14635 433 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 DRD1P21728 446 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 COILP38432 576 aaPredicted RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 SEC13P55735 322 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 GEMIN4P57678 1058 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CORO7P57737 925 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 PRKCQQ04759 706 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF33AQ06730 810 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 OASLQ15646 514 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CYP1B1Q16678 543 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 DNAJC21Q5F1R6 531 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 TMEM196Q5HYL7 178 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 FAM182AQ5T1J6 154 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms