RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 BCAT1P54687 386 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RIPK4P57078 832 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ACTR2P61160 394 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RPS7P62081 194 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MPP1Q00013 466 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 GPS1Q13098 491 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CUL4BQ13620 913 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 DYRK1AQ13627 763 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 HLXQ14774 488 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PTCHD3Q3KNS1 767 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM153CQ494X1 144 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ZNF628Q5EBL2 1059 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CERCAMQ5T4B2 595 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 PRAMEF17Q5VTA0 474 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NFRKBQ6P4R8 1299 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RINLQ6ZS11 566 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 C15orf52Q6ZUT6 534 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RSRC2Q7L4I2 434 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RAB11FIP2Q7L804 512 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MAATS1Q7Z4T9 603 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ANKS1BQ7Z6G8 1248 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CTU1Q7Z7A3 348 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CLNKQ7Z7G1 428 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CPOQ8IVL8 374 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 SLC15A3Q8IY34 581 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ADGRG5Q8IZF4 528 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NME8Q8N427 588 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM109AQ8N4B1 249 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NGEFQ8N5V2 710 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 ESX1Q8N693 406 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC191Q8NCU4 936 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MBD3L2Q8NHZ7 208 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 DNAJB14Q8TBM8 379 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 WDR60Q8WVS4 1066 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 RILPL2Q969X0 211 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 GRAMD1AQ96CP6 724 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MAELQ96JY0 434 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 TRAPPC9Q96Q05 1148 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 TMEM79Q9BSE2 394 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 EPS8L2Q9H6S3 715 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MYOZ2Q9NPC6 264 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 UBN1Q9NPG3 1134 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 IFT80Q9P2H3 777 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 DBF4Q9UBU7 674 aaPredicted RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 TRMT112Q9UI30 125 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NFU1Q9UMS0 254 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 DAPP1Q9UN19 280 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MRPS17Q9Y2R5 130 aaKnown RBP2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 SCINQ9Y6U3 715 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 TRIOO75962 3097 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 NOTCH3Q9UM47 2321 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 MGAMO43451 1857 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 SIPA1L1O43166 1804 aa2.77□□□□□ -1.97
SMARCB1-208ENST00000634926 DDX60LQ5H9U9 1706 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MYO15AQ9UKN7 3530 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 RPAP1Q9BWH6 1393 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 ITIH6Q6UXX5 1313 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MYO3BQ8WXR4 1341 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 DOCK1Q14185 1865 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 PNMA6EA0A0J9YXQ4 647 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A18PA6NE21 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A16PA6NEW6 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A9PA6NNJ1 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 EFCAB8A8MWE9 144 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A5PA8MXJ8 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 F5H697 171 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 H0Y3Z8 333 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 GCOM1H8Y6P7 765 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 J3KTA2 159 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SMIM22K7EJ46 135 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TOR1BO14657 336 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TCERG1O14776 1098 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 ZSCAN9O15535 394 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TRIAP1O43715 76 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SNX2O60749 519 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 URI1O94763 535 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 UFL1O94874 794 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MBD4O95243 580 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TK1P04183 234 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CENPBP07199 599 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A15PP0C7V4 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM90A14PP0C7W9 464 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 XBP1P17861 261 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CNTFP26441 200 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 KLRK1P26718 216 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 EPHA3P29320 983 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CD6P30203 668 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 UQCRC1P31930 480 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 ELF1P32519 619 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MCM2P49736 904 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MMP14P50281 582 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 GATMP50440 423 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 PGDP52209 483 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 PRKAA2P54646 552 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 RPS8P62241 208 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 VAMP2P63027 116 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TIAL1Q01085 375 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FPGSQ05932 587 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 GRM4Q14833 912 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms