RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	DCDC2	Q9UHG0	476 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACOT9	Q9Y305	439 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	GABBR2	O75899	941 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	AP2A1	O95782	977 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	S100B	P04271	92 aa	Predicted RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	CST5	P28325	142 aa	Predicted RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	TSNAXIP1	Q2TAA8	658 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	ANKRD20A4	Q4UJ75	823 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	NEPRO	Q6NW34	567 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	FBXL22	Q6P050	247 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	FRA10AC1	Q70Z53	315 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC41A1	Q8IVJ1	513 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	RTL3	Q8N8U3	475 aa	Known RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	CPNE1	Q99829	537 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	CIPC	Q9C0C6	399 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	ERI2	A8K979	691 aa	Known RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	SNX3	O60493	162 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	SHOX2	O60902	331 aa	Predicted RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	RALB	P11234	206 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	RAD51	Q06609	339 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	PCID2	Q5JVF3	399 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	LDB1	Q86U70	411 aa	Predicted RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	NPW	Q8N729	165 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	AGAP2	Q99490	1192 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	GPAM	Q9HCL2	828 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	NSMCE4A	Q9NXX6	385 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	NCF1B	A6NI72	391 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	NCF1C	A8MVU1	366 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543		J3KR12	359 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	DNAJC6	O75061	913 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	NCF1	P14598	390 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CASP2	P42575	452 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CD151	P48509	253 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	MGAT3	Q09327	533 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SEMA5A	Q13591	1074 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	PDZD8	Q8NEN9	1154 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CENPT	Q96BT3	561 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TEKT5	Q96M29	485 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CYP2S1	Q96SQ9	504 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TMEM120A	Q9BXJ8	343 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	BPIFA1	Q9NP55	256 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CHKB	Q9Y259	395 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	MYO18A	Q92614	2054 aa	Known RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	C2orf81	A6NN90	581 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CCL16	O15467	120 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SNX2	O60749	519 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GPR17	Q13304	367 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GRTP1	Q5TC63	336 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	PDPK2P	Q6A1A2	396 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	ADGRD1	Q6QNK2	874 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TAS1R1	Q7RTX1	841 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	PHF21B	Q96EK2	531 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	HHIPL1	Q96JK4	782 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SEPT3	Q9UH03	358 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GOLGA8Q	A0A0J9YX86	632 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	HEATR9	A2RTY3	570 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GOLGA8O	A6NCC3	632 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GOLGA8N	F8WBI6	632 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	MT-CO1	P00395	513 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	RHOQ	P17081	205 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	NMBR	P28336	390 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SCTR	P47872	440 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	ARHGAP15	Q53QZ3	475 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	MRNIP	Q6NTE8	343 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	DIS3L	Q8TF46	1054 aa	Known RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	UBE2O	Q9C0C9	1292 aa	Known RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	ZCWPW1	Q9H0M4	648 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	EPB41L4B	Q9H329	900 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TMEM30A	Q9NV96	361 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	PKP3	Q9Y446	797 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACTL7B	Q9Y614	415 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GLP2R	O95838	553 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	GSC	P56915	257 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CYP4F8	P98187	520 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TRIP4	Q15650	581 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	PDCD2	Q16342	344 aa	Predicted RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	CAND1	Q86VP6	1230 aa	Known RBP	13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SMOC2	Q9H3U7	446 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	TLR6	Q9Y2C9	796 aa		13.49	□□□□□ -0.25
NRXN1-233	ENST00000630543	SPECC1L-ADORA2A	F8WAN1	911 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543		M0QZQ0	153 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SKAP2	O75563	359 aa	Predicted RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ITGB6	P18564	788 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	LAG3	P18627	525 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	CNTF	P26441	200 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ABL2	P42684	1182 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	OCRL	Q01968	901 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPID	Q08752	370 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	LBR	Q14739	615 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	XKR4	Q5GH76	650 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	CCDC124	Q96CT7	223 aa	Known RBP	13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	HAPLN3	Q96S86	360 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	EGFL8	Q99944	293 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	ARMCX1	Q9P291	453 aa		13.48	□□□□□ -0.25
NRXN1-233	ENST00000630543	SQOR	Q9Y6N5	450 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms