RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 SNAP29O95721 258 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 MT-ND3P03897 115 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 THEGLP0DJG4 465 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 ZBTB48P10074 688 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 ACTN1P12814 892 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 SELLP14151 372 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 HOXB8P17481 243 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 GRK4P32298 578 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 IDUAP35475 653 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PCP4P48539 62 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 HOXA1P49639 335 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 C21orf59P57076 290 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 NLRP11P59045 1033 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 ZNF280AP59817 542 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 NKX3-2P78367 333 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 DSG1Q02413 1049 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 C2orf54Q08AI8 447 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 TARDBPQ13148 414 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMN2-214ENST00000626847 TBX2Q13207 712 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 PLD1Q13393 1074 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 KRT32Q14532 448 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 DUOXA2Q1HG44 320 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 HES5Q5TA89 166 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 C1orf146Q5VVC0 180 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PAPD7Q5XG87 772 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 DUPD1Q68J44 220 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 KLHDC10Q6PID8 442 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 SYCE2Q6PIF2 218 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 DCLRE1AQ6PJP8 1040 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 STXBP4Q6ZWJ1 553 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 CYFIP1Q7L576 1253 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 ZNF589Q86UQ0 364 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 TSPYL6Q8N831 410 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 SRFBP1Q8NEF9 429 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 MCOLN3Q8TDD5 553 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 UTP15Q8TED0 518 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PRCCQ92733 491 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 MTBPQ96DY7 904 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PHACTR3Q96KR7 559 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 TWNKQ96RR1 684 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 DDX23Q9BUQ8 820 aaKnown RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 SLC6A15Q9H2J7 730 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 RNF41Q9H4P4 317 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 SLA2Q9H6Q3 261 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 EPS8L2Q9H6S3 715 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 RASSF1Q9NS23 344 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 NCKIPSDQ9NZQ3 722 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 APEX2Q9UBZ4 518 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 NKX1-2Q9UD57 310 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 ENTPD4Q9Y227 616 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 USP15Q9Y4E8 981 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 FLT1P17948 1338 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 MEIS3P2A8K0S8 358 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 H3BNX3 289 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 KCNQ3O43525 872 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 CIDEAO60543 219 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 PDE8AO60658 829 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 DCTN3O75935 186 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 CDK14O94921 469 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 UBOX5O94941 541 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 UNC5CO95185 931 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 GJB6O95452 261 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 EYA4O95677 639 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 WDPCPO95876 746 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 CLPTM1O96005 669 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 FUCA1P04066 466 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 NFICP08651 508 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 MYL4P12829 197 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 NID1P14543 1247 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 ETS2P15036 469 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 PHKA1P46020 1223 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 HCAR3P49019 387 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 SLC26A2P50443 739 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 DUSP4Q13115 394 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 MED21Q13503 144 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 CUL2Q13617 745 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 GALNT3Q14435 633 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 POU6F1Q14863 301 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 C16orf72Q14CZ0 275 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 FASTKD3Q14CZ7 662 aaKnown RBP8.46□□□□□ -1.05
SMN2-214ENST00000626847 SLC39A14Q15043 492 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 ARSHQ5FYA8 562 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 TNFAIP8L3Q5GJ75 292 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 EXOSC6Q5RKV6 272 aaKnown RBP8.46□□□□□ -1.05
SMN2-214ENST00000626847 RNF43Q68DV7 783 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 OVOS1Q6IE37 1185 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 GALNT5Q7Z7M9 940 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 BBS7Q8IWZ6 715 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 AOPEPQ8N6M6 819 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 IL17RDQ8NFM7 739 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 OR7D4Q8NG98 312 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 DENND1AQ8TEH3 1009 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 DEPDC1BQ8WUY9 529 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 KBTBD7Q8WVZ9 684 aa8.46□□□□□ -1.05
SMN2-214ENST00000626847 AHCYL2Q96HN2 611 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms