RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ISCUQ9H1K1 167 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 KRCC1Q9NPI7 259 aaPredicted RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 CDH22Q9UJ99 828 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 FEM1BQ9UK73 627 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 DERAQ9Y315 318 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 SLC4A4Q9Y6R1 1079 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 B9A039 149 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 STRNO43815 780 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 METTL18O95568 372 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 ARSAP15289 507 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 PRKCHP24723 683 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 GOLGA8FQ08AF8 430 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 GPR18Q14330 331 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 AP5B1Q2VPB7 878 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 Q5PR19 223 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 ZNF324BQ6AW86 544 aaPredicted RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 SLC16A12Q6ZSM3 486 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 Q6ZTK2 550 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 NKAPQ8N5F7 415 aaKnown RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 HORMAD2Q8N7B1 307 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 ANKRD44Q8N8A2 993 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 FAR1Q8WVX9 515 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 TRIM63Q969Q1 353 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 TBC1D20Q96BZ9 403 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 FRG2BQ96QU4 278 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 POLDIP3Q9BY77 421 aaKnown RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 PPCSQ9HAB8 311 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 NCKIPSDQ9NZQ3 722 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 PLEKHB1Q9UF11 243 aaPredicted RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 DHDHQ9UQ10 334 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 RRP7AQ9Y3A4 280 aaKnown RBP3.6□□□□□ -1.83
VBP1-204ENST00000625964 INSL5Q9Y5Q6 135 aa3.6□□□□□ -1.83
VBP1-204ENST00000625964 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 CBX6O95503 412 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 DDAH2O95865 285 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 CYP1A2P05177 515 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 UNGP13051 313 aaPredicted RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 SKIV2L2P42285 1042 aaKnown RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 ENTPD1P49961 510 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 MVDP53602 400 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 PGGT1BP53609 377 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 ARHGAP8P85298 464 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 BYSLQ13895 437 aaKnown RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 TMEM268Q5VZI3 342 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 AADACL2Q6P093 401 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 ENGASEQ8NFI3 743 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 GABPB2Q8TAK5 448 aaPredicted RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 SPPL3Q8TCT6 385 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 WDR77Q9BQA1 342 aaPredicted RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 SF3B5Q9BWJ5 86 aaKnown RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 ITM2CQ9NQX7 267 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 TLR8Q9NR97 1041 aaKnown RBP3.59□□□□□ -1.84
VBP1-204ENST00000625964 ZDHHC7Q9NXF8 308 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.84
VBP1-204ENST00000625964 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 SAC3D1A6NKF1 404 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 STMND1H3BQB6 276 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 HBP1O60381 514 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 TNNT1P13805 278 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 CPA1P15085 419 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 CHRNB2P17787 502 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 HALP42357 657 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 KCNJ4P48050 445 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 PAPOLAP51003 745 aaKnown RBP3.58□□□□□ -1.84
VBP1-204ENST00000625964 CLCNKBP51801 687 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 IL13RA2Q14627 380 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 SYTL3Q4VX76 610 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 WDR5BQ86VZ2 330 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 KDM1BQ8NB78 822 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 NCSTNQ92542 709 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 COG8Q96MW5 612 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 TEFMQ96QE5 360 aaKnown RBP3.58□□□□□ -1.84
VBP1-204ENST00000625964 DNAJC16Q9Y2G8 782 aa3.58□□□□□ -1.84
VBP1-204ENST00000625964 DDTLA6NHG4 134 aaPredicted RBP3.57□□□□□ -1.84
VBP1-204ENST00000625964 C17orf100A8MU93 164 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 IFRD1O00458 451 aaPredicted RBP3.57□□□□□ -1.84
VBP1-204ENST00000625964 SPTLC2O15270 562 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 PIP5K1CO60331 668 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 FGF3P11487 239 aaPredicted RBP3.57□□□□□ -1.84
VBP1-204ENST00000625964 ARRB2P32121 409 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 AVPR1AP37288 418 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 RFX2P48378 723 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 RASSF2P50749 326 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 ARL4CP56559 192 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 SELENOVP59797 346 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 CBWD5Q5RIA9 395 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 DCAF12L2Q5VW00 463 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 HEPHL1Q6MZM0 1159 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 TMEM71Q6P5X7 295 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 CADM3Q8N126 398 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 ANKRD42Q8N9B4 389 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 CEP76Q8TAP6 659 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 HDAC7Q8WUI4 952 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 OIT3Q8WWZ8 545 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 LMLNQ96KR4 655 aa3.57□□□□□ -1.84
VBP1-204ENST00000625964 HERPUD2Q9BSE4 406 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms