RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 WDR5BQ86VZ2 330 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 SCAIQ8N9R8 606 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 FSIP1Q8NA03 581 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 FAM84BQ96KN1 310 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 IFT27Q9BW83 186 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 SEZ6LQ9BYH1 1024 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 TLR8Q9NR97 1041 aaKnown RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 TMLHEQ9NVH6 421 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 SAC3D1A6NKF1 404 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 GNLYP22749 145 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 CLCNKBP51801 687 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 RPS6KA3P51812 740 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 CUL4BQ13620 913 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 FSCBQ5H9T9 825 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 TBC1D9BQ66K14 1250 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 FAM83HQ6ZRV2 1179 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 RINLQ6ZS11 566 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 CERS3Q8IU89 383 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 NEXN-AS1Q8NBZ9 246 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 OR6Y1Q8NGX8 325 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 GOLGA1Q92805 767 aa4.71□□□□□ -1.66
BRCA1-229ENST00000621897 KTI12Q96EK9 354 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 BCCIPQ9P287 314 aaKnown RBP eCLIP4.71□□□□□ -1.66
BRCA1-229ENST00000621897 CCNT1O60563 726 aaKnown RBP4.7□□□□□ -1.66
BRCA1-229ENST00000621897 ITGB8P26012 769 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 PNPLA4P41247 253 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 KCNJ4P48050 445 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 RBM5P52756 815 aaKnown RBP eCLIP4.7□□□□□ -1.66
BRCA1-229ENST00000621897 MVDP53602 400 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 MORC3Q14149 939 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 NFATC4Q14934 902 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 ZNF484Q5JVG2 852 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 NADSYN1Q6IA69 706 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 CAPRIN2Q6IMN6 1127 aaKnown RBP4.7□□□□□ -1.66
BRCA1-229ENST00000621897 AADACL2Q6P093 401 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 DLK2Q6UY11 383 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 SERPINA11Q86U17 422 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 ZNF333Q96JL9 665 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 HDAC6Q9UBN7 1215 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 SEL1LQ9UBV2 794 aa4.7□□□□□ -1.66
BRCA1-229ENST00000621897 ARID4BQ4LE39 1312 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-229ENST00000621897 TMEM247A6NEH6 219 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 VWA5AO00534 786 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
BRCA1-229ENST00000621897 TFRCP02786 760 aaKnown RBP4.69□□□□□ -1.66
BRCA1-229ENST00000621897 MYZAPP0CAP1 466 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 PTPN9P43378 593 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 MTNR1AP48039 350 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 CDH12P55289 794 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 TRAF3Q13114 568 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 THOC5Q13769 683 aaKnown RBP4.69□□□□□ -1.66
BRCA1-229ENST00000621897 BYSLQ13895 437 aaKnown RBP4.69□□□□□ -1.66
BRCA1-229ENST00000621897 SHBQ15464 509 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 AP5B1Q2VPB7 878 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 RUNDC3AQ59EK9 446 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 TMEM268Q5VZI3 342 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 ATG9BQ674R7 924 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 SAMD3Q8N6K7 520 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 LINS1Q8NG48 757 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 LMO3Q8TAP4 145 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 SLC35F5Q8WV83 523 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 LMLNQ96KR4 655 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 TEFMQ96QE5 360 aaKnown RBP4.69□□□□□ -1.66
BRCA1-229ENST00000621897 PSMD1Q99460 953 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 LHPPQ9H008 270 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 CXorf56Q9H5V9 222 aa4.69□□□□□ -1.66
BRCA1-229ENST00000621897 C17orf102A2RUQ5 167 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 ACOT8O14734 319 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 FAM155BO75949 473 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 SOX30O94993 753 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 PPP1R3DO95685 299 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 GLUD1P00367 558 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 RFC1P35251 1148 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-229ENST00000621897 CHKAP35790 457 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 DPP6P42658 865 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 GLUD2P49448 558 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 POSTNQ15063 836 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 TDRD12Q587J7 1177 aaKnown RBP4.68□□□□□ -1.66
BRCA1-229ENST00000621897 NOL8Q76FK4 1167 aaKnown RBP4.68□□□□□ -1.66
BRCA1-229ENST00000621897 ZDHHC23Q8IYP9 409 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 MIGA1Q8NAN2 632 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 RILPL2Q969X0 211 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 CHODLQ9H9P2 273 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 NLKQ9UBE8 527 aa4.68□□□□□ -1.66
BRCA1-229ENST00000621897 EME2A4GXA9 379 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-229ENST00000621897 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 CBX6O95503 412 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 PRSS2P07478 247 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 ZNF12P17014 697 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 CD72P21854 359 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 ARHGAP8P85298 464 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 DSC1Q08554 894 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 SH2D4BQ5SQS7 431 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 FAM83BQ5T0W9 1011 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 C8orf82Q6P1X6 216 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms