RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 BST1Q10588 318 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CRHR2Q13324 411 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 BLMHQ13867 455 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM83EQ2M2I3 478 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 MRNIPQ6NTE8 343 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 TEX9Q8N6V9 391 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 RNF148Q8N7C7 305 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF398Q8TD17 642 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 APBA2Q99767 749 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ACAT2Q9BWD1 397 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ZDHHC6Q9H6R6 413 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SSU72Q9NP77 194 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 MSRAQ9UJ68 235 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 RUVBL2Q9Y230 463 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 NDUFB5O43674 189 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 EIF2S1P05198 315 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 DDX5P17844 614 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 GNAZP19086 355 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 KCNA3P22001 575 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CDH5P33151 784 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 RAP1GDS1P52306 607 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 AQP5P55064 265 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 KLC1Q07866 573 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 NOMO1Q15155 1222 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM183BPQ6ZVS7 135 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CMASQ8NFW8 434 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 AUTS2Q8WXX7 1259 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ABHD8Q96I13 439 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ACOX2Q99424 681 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 LHX5Q9H2C1 402 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 MINDY3Q9H8M7 445 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CYLDQ9NQC7 956 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 NMRK1Q9NWW6 199 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 TAS2R1Q9NYW7 299 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 DLGAP2Q9P1A6 1054 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 OR12D3Q9UGF7 316 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SIX4Q9UIU6 781 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 GNG14A0A1W2PPG7 69 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC15A5A6NIM6 579 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 E7ESA3 106 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ABCB1P08183 1280 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 GABRR2P28476 465 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 VHLP40337 213 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 CCNHP51946 323 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FKBP1BP68106 108 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 MRPS6P82932 125 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ANKRD20A4Q4UJ75 823 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 TMEM199Q8N511 208 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 C10orf53Q8N6V4 93 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FNIP1Q8TF40 1166 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 WDR60Q8WVS4 1066 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SUSD6Q92537 303 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 SMARCD1Q96GM5 515 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FAXDC2Q96IV6 333 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 ASB7Q9H672 318 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 TLE6Q9H808 572 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 GPAMQ9HCL2 828 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM105AQ9NUU6 356 aa8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 MYO18AQ92614 2054 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-204ENST00000620992 GPR25O00155 361 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 SMAPO00193 183 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 FAM189A1O60320 539 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 KPNA6O60684 536 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ITGBL1O95965 494 aaPredicted RBP8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 TOP3BO95985 862 aaKnown RBP8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ALOX15P16050 662 aaPredicted RBP8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ATP6V1C1P21283 382 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ICAM3P32942 547 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ATP5C1P36542 298 aaKnown RBP8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF143P52747 638 aaPredicted RBP8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 TMC5Q6UXY8 1006 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 LBX2Q6XYB7 198 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 MZB1Q8WU39 189 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 RNF157Q96PX1 679 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 ACTR8Q9H981 624 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 APPL1Q9UKG1 709 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 RNF112Q9ULX5 631 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 DTNAQ9Y4J8 743 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 TEX264Q9Y6I9 313 aa8.4□□□□□ -1.07
PTPDC1-204ENST00000620992 VPS26AO75436 327 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ARIH2O95376 493 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 TSPAN8P19075 237 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF280AP59817 542 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ESRRGP62508 458 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CAMK2GQ13555 558 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 PRKD1Q15139 912 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF470Q6ECI4 717 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms